Sciurus carolinensis (gray squirrel): 124979988
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Entry
124979988 CDS
T08117
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03018
RNA degradation
ncar04940
Type I diabetes mellitus
ncar05134
Legionellosis
ncar05152
Tuberculosis
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124979988
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
124979988
05152 Tuberculosis
124979988
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124979988
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
124979988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124979988
03110 Chaperones and folding catalysts [BR:
ncar03110
]
124979988
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124979988
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124979988
Enzymes [BR:
ncar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124979988
Messenger RNA biogenesis [BR:
ncar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124979988
Chaperones and folding catalysts [BR:
ncar03110
]
Heat shock proteins
HSP60 / Chaperonin
124979988
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124979988
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124979988
Exosomal proteins of other body fluids (saliva and urine)
124979988
Exosomal proteins of breast cancer cells
124979988
Exosomal proteins of colorectal cancer cells
124979988
Exosomal proteins of bladder cancer cells
124979988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
124979988
NCBI-ProteinID:
XP_047400995
LinkDB
All DBs
Position
3:complement(120931193..120933225)
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLPTVLRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMLAVDAVIEELKKQSKPVTTPEEIAQVATISANGDK
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFVDNRKNQLKDMAIATGGAVFGEEGLTLNIEDVQPHDLGKVGEVIVTKDDAMLLKG
KGDKAQIEKRIQEIAEQLETTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDSLTPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLT
TAEVVVTEIPKEEKDPGMGAMDGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgattacccacagtccttcgccagatgagaccagtgtctagggcactggctcct
catctcactcgggcttatgccaaagatgtaaaattcggtgcggatgcccgagccttaatg
cttcaaggtgtagaccttttagccgatgctgtagctgttacaatggggccaaagggaaga
acggtaattattgaacagagttggggaagtcccaaagtaacaaaagatggtgtgactgtt
gcaaagtcaattgatttaaaggataaatacaaaaatattggagctaaacttgttcaagat
gttgccaataacacaaatgaagaggccggggatggtaccaccactgctactgtactggca
cgctctattgcgaaggaaggctttgagaagattagcaaaggtgctaatcctgtggaaatc
agaagaggtgtgatgttagccgttgatgctgtaattgaggaacttaagaagcagtctaaa
cctgtgacaactcctgaagaaattgcccaggttgctacaatatctgcaaatggagacaaa
gaaattggcaacatcatttctgatgcaatgaaaaaggttggaagaaagggtgtgatcaca
gtaaaggatggaaaaacactcaatgatgaattagaaattatcgaaggcatgaagtttgat
cgaggttatatttctccctacttcattaatacatcaaaaggtcagaaatgtgaattccag
gatgcttatgttctattgagtgaaaagaaaatatctagcgtccagtccatcgtacctgct
cttgaaattgccaatgctcaccggaaacccttggtcataattgctgaagatgttgatgga
gaagctctaagtacacttgttttgaacaggctaaaagttggtcttcaggttgttgcagtt
aaagctccaggttttgttgacaacagaaaaaaccaacttaaagatatggctattgctact
gggggcgcagtgtttggtgaggagggtttgaccctaaatattgaagatgttcagcctcac
gacttaggaaaagttggagaggtcattgtcaccaaagatgatgccatgcttttgaaagga
aaaggtgataaagctcaaattgaaaagcgtattcaagaaatcgcagaacaattagaaacc
acaactagtgaatatgaaaaggaaaaactaaatgaacgactggcaaaactttcagatgga
gtagctgtgctgaaggttggtgggacaagtgatgtcgaagtgaatgaaaagaaagacaga
gttacagatgccctcaatgctacaagagctgctgttgaagaaggcattgttctgggtggg
ggttgtgctctgcttcggtgcattccagccttggactcactaactccagctaatgaagat
caaaaaattggcatagaaatcattaaaagaacactcaaaattcctgcaatgaccattgct
aagaatgcaggtgttgaaggatctctgatagttgagaaaattctgcagagttcctcagaa
gttggttatgatgctatgcttggagattttgtgaatatggtggaaaaaggaatcattgac
ccaacaaaggttgtaagaactgctctactggatgctgctggagttgcttctctgttaact
acagcagaagttgtagttacagaaattcctaaagaagaaaaggaccctggaatgggtgca
atggatggaatgggaggtggtatgggaggtggcatgttctaa
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