Sciurus carolinensis (gray squirrel): 124980003
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Entry
124980003 CDS
T08117
Name
(RefSeq) TATA-binding protein-associated factor 2N
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
ncar05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124980003
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124980003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124980003
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124980003
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124980003
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124980003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
124980003
NCBI-ProteinID:
XP_047401029
LinkDB
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Position
3:complement(37560933..37590664)
Genome browser
AA seq
592 aa
AA seq
DB search
MSDSGSYGQSGGEQQSYSSYGNQGNQGYGQAQQSYSGYGQTSDSSYGQNYGGYPGYGQSQ
SGYSQSYGGYENQKQSSYGQQSYNNQGQQNTESSGGQGGRAPSYDQSDYGQQDSYDQQSG
YDQQQGSYNEQSNYDQQHDSYNQNQQSYHSQRENYSHHTQDDRRDVSRYGEDNRGYGGSQ
GGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGPRPDADSESDNSDNNTIFVQGL
GEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAID
WFDGKEFHGNIIKVSFATRRPEFMRGGGSGGGRRGRGGYRGRGGFQGRGGDPKNGDWVCP
NPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGD
RSGGGYGGDRSGGSGYGGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGG
DRGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGERGGGGGGGYGGDRSG
GYGGDRSGGGYGGDRGGGYGGDRGGYGGDRGGYGGKMGGRNDYRNDQRNRPY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattctggaagttacggtcagtctgggggtgaacagcaaagttattcttcctat
ggaaatcaaggcaaccaaggctatggacaagcacaacaaagctattctggctatggacaa
acgtctgattcttcatatggacagaactatggtggttatcccggttatggacaaagccaa
tcaggttattcacagtcctacggtggttatgagaatcaaaagcagagctcatatggccag
caatcatataataaccaaggacagcaaaacacggaatcatcaggaggccaaggtggaaga
gcgccttcgtatgaccagtcagactatggtcaacaagattcatatgaccagcagtcaggc
tatgatcaacagcaaggctcatataacgagcagtcaaattatgatcagcagcatgattcc
tataatcaaaaccagcaatcatatcattcacaaagagaaaactatagccaccacacacaa
gatgaccgtcgtgatgtgagtaggtatggagaagataatagaggatatggcgggtcacag
ggaggaggtagagggcgtgggggatatgacaaggatggaagaggtcctatgacaggatca
agtggtggtgaccgcggtggcttcaaaaattttggtggtcacagggattatggaccaaga
ccagatgctgattcagaatctgataattcagataacaacacaatctttgtgcaaggactt
ggggagggtgtgtctactgatcaagtgggagagttctttaagcaaataggtatcatcaag
acaaataagaagactggaaagccgatgataaatctttacacagacaaagacacagggaag
ccaaaaggggaggcaacagtgtcatttgatgatcccccttcagctaaggcagccattgac
tggtttgatggaaaagaattccatggcaacatcattaaagtgtcctttgccaccagaaga
cctgaattcatgagaggagggggaagtggaggtgggcggcgaggtagaggaggatataga
ggtcgcggaggctttcagggaagaggtggtgaccccaaaaatggggactgggtttgtcct
aatccgtcatgtggaaatatgaactttgctcgaaggaattcctgtaatcagtgcaatgag
cctagaccagaggattctcgtccctcaggaggagatttccgggggagaggctacggtgga
gagagaggctacagaggtcgtgggggcagaggtggagaccgaggcggctatggtggagac
agaagtgggggtggctatggtggagacaggagtggtggcagtggctatggtggagataga
agtgggggtggctatggtggtgacagaagtgggggtggctatggtggggacagaggaggt
ggctatggtggagaccgaggaggaggctatggtggagaccgaggaggtggctatggtgga
gaccgaggtggctacggaggagaccgaggcggctacggaggagaccgaggcggctatgga
ggagaccgaggcggctacggaggagaccgaggcggctatggaggagaccgaagtcggggg
ggctatggaggagaacgtggtggtggtggtggtggaggctatggaggagaccgaagtgga
ggctacggaggagacaggagtggtgggggctatggaggagaccgaggtgggggctatgga
ggagaccgaggtggctacggaggagaccgaggtggctacgggggcaaaatgggaggaaga
aacgactacagaaatgatcagcgcaaccgaccgtactga
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