Sciurus carolinensis (gray squirrel): 124980053
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Entry
124980053 CDS
T08117
Name
(RefSeq) keratin, type I cytoskeletal 42
KO
K07604
type I keratin, acidic
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04915
Estrogen signaling pathway
ncar05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
124980053
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
124980053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124980053
04147 Exosome [BR:
ncar04147
]
124980053
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
124980053
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124980053
Exosomal proteins of other body fluids (saliva and urine)
124980053
Exosomal proteins of colorectal cancer cells
124980053
Exosomal proteins of melanoma cells
124980053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
FliD_C
Bacillus_HBL
AIF-1
DUF1664
ATG14
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
124980053
NCBI-ProteinID:
XP_047401115
LinkDB
All DBs
Position
3:20832934..20839850
Genome browser
AA seq
454 aa
AA seq
DB search
MAATTTSIRQFSTSGSVKGLCMPGGSFSRMSSVRVGGACRAPSLLGGGGSCGNMSVTSSR
FSSSFGGGYGGGYTCNLGGGFGSSFGVSDALLGGGEKETMQNLNDRLASYLDKVRALEEA
NADLEMKIREWYKKQGPGPARDYSHYFKTIEELRSKILAATIDNASFVLQIDNARLAADD
FRTKYETELNLRMSVEADINGLRRVLDELTLARTDLEMQIESLKEELAYLRKNHEEEMNA
LRGQVGGDVSVEMDAAPGVDLSRVLNEMRDQYEKMAEKNRKDAEDWFFTKTEELNREVAT
STEALQSSRTEITELRRSVQNLEIELQSQISMKASLENSLAETEARYGAQLSQLQGLISS
IEQQLCELRCDMERQNHEYQVLLDVKTRLEQEIATYRRLLEGEDSHLATQYSSSLVSQPS
RDAMVTSRQVRTIVEEVQDGKVVSSREQVHRSTH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccaccaccagcatccgccagttctcaacctccggctctgtcaaaggcctg
tgcatgcctggcgggagtttctcccggatgtcctctgtccgtgtcgggggtgcctgtcgg
gcccccagcctcctgggaggcggcggcagctgtggcaacatgtcagtcacttcgtcccgc
ttctcatcgagtttcgggggcggctatggtggtggctacacctgcaacctgggtgggggc
tttggctccagctttggagtgtcagatgccctgctggggggcggcgagaaggagaccatg
cagaacctcaacgaccgcctggcctcctacctggacaaggtgcgtgccctggaggaggcc
aacgccgacctggagatgaagatccgtgaatggtacaaaaagcagggcccggggcctgcc
cgcgactacagccactacttcaagaccatcgaggagctgcggagcaagatcctggcagct
accatcgacaatgccagcttcgtgctccagatcgacaatgcccgtctggccgctgacgac
ttccgcaccaagtacgagacagagctgaacctgcgcatgagcgtggaggccgacatcaat
ggcctgcgcagggtgctggacgagctgaccctggccaggactgacctggagatgcagatc
gagagcctcaaggaggagctggcctacctgaggaagaaccacgaggaggaaatgaatgcc
cttcgtggccaagtgggtggggacgtcagtgtggagatggacgcagcccctggcgtggac
ctgagccgtgtcctgaatgagatgcgcgaccagtatgagaagatggccgagaagaaccgc
aaggatgccgaggactggttcttcaccaagacggaggagctgaaccgtgaggtggccacc
agcaccgaagccctgcagagcagcaggacagagatcacagagctccgccgctccgtgcag
aacctggagatagagctgcagtcccagatcagcatgaaagcatcactggagaacagcctg
gccgagacggaggcgcgctacggggcccagctgtcccagctgcaggggctcatcagcagc
atcgagcagcagctgtgcgagctgcgctgcgacatggagcgccagaaccacgagtaccag
gtgctgctggacgtgaagacgcggctggagcaggagatcgccacctaccgccgcctgctg
gagggcgaggactcccacctggctactcagtattcctcgtccctggtctcgcagccctct
cgggatgccatggtgacaagccgccaggtgcgcaccattgtggaggaagttcaggacggc
aaggtggtctcctcccgcgagcaggtccaccgctccactcactga
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