KEGG   Sciurus carolinensis (gray squirrel): 124980053
Entry
124980053         CDS       T08117                                 
Name
(RefSeq) keratin, type I cytoskeletal 42
  KO
K07604  type I keratin, acidic
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04915  Estrogen signaling pathway
ncar05150  Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09150 Organismal Systems
  09152 Endocrine system
   04915 Estrogen signaling pathway
    124980053
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    124980053
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ncar04812]
    124980053
   04147 Exosome [BR:ncar04147]
    124980053
Cytoskeleton proteins [BR:ncar04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     124980053
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   124980053
  Exosomal proteins of other body fluids (saliva and urine)
   124980053
  Exosomal proteins of colorectal cancer cells
   124980053
  Exosomal proteins of melanoma cells
   124980053
SSDB
Motif
Pfam: Filament TPR_MLP1_2 FliD_C Bacillus_HBL AIF-1 DUF1664 ATG14 CENP-F_leu_zip
Other DBs
NCBI-GeneID: 124980053
NCBI-ProteinID: XP_047401115
LinkDB
Position
3:20832934..20839850
AA seq 454 aa
MAATTTSIRQFSTSGSVKGLCMPGGSFSRMSSVRVGGACRAPSLLGGGGSCGNMSVTSSR
FSSSFGGGYGGGYTCNLGGGFGSSFGVSDALLGGGEKETMQNLNDRLASYLDKVRALEEA
NADLEMKIREWYKKQGPGPARDYSHYFKTIEELRSKILAATIDNASFVLQIDNARLAADD
FRTKYETELNLRMSVEADINGLRRVLDELTLARTDLEMQIESLKEELAYLRKNHEEEMNA
LRGQVGGDVSVEMDAAPGVDLSRVLNEMRDQYEKMAEKNRKDAEDWFFTKTEELNREVAT
STEALQSSRTEITELRRSVQNLEIELQSQISMKASLENSLAETEARYGAQLSQLQGLISS
IEQQLCELRCDMERQNHEYQVLLDVKTRLEQEIATYRRLLEGEDSHLATQYSSSLVSQPS
RDAMVTSRQVRTIVEEVQDGKVVSSREQVHRSTH
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggctgccaccaccaccagcatccgccagttctcaacctccggctctgtcaaaggcctg
tgcatgcctggcgggagtttctcccggatgtcctctgtccgtgtcgggggtgcctgtcgg
gcccccagcctcctgggaggcggcggcagctgtggcaacatgtcagtcacttcgtcccgc
ttctcatcgagtttcgggggcggctatggtggtggctacacctgcaacctgggtgggggc
tttggctccagctttggagtgtcagatgccctgctggggggcggcgagaaggagaccatg
cagaacctcaacgaccgcctggcctcctacctggacaaggtgcgtgccctggaggaggcc
aacgccgacctggagatgaagatccgtgaatggtacaaaaagcagggcccggggcctgcc
cgcgactacagccactacttcaagaccatcgaggagctgcggagcaagatcctggcagct
accatcgacaatgccagcttcgtgctccagatcgacaatgcccgtctggccgctgacgac
ttccgcaccaagtacgagacagagctgaacctgcgcatgagcgtggaggccgacatcaat
ggcctgcgcagggtgctggacgagctgaccctggccaggactgacctggagatgcagatc
gagagcctcaaggaggagctggcctacctgaggaagaaccacgaggaggaaatgaatgcc
cttcgtggccaagtgggtggggacgtcagtgtggagatggacgcagcccctggcgtggac
ctgagccgtgtcctgaatgagatgcgcgaccagtatgagaagatggccgagaagaaccgc
aaggatgccgaggactggttcttcaccaagacggaggagctgaaccgtgaggtggccacc
agcaccgaagccctgcagagcagcaggacagagatcacagagctccgccgctccgtgcag
aacctggagatagagctgcagtcccagatcagcatgaaagcatcactggagaacagcctg
gccgagacggaggcgcgctacggggcccagctgtcccagctgcaggggctcatcagcagc
atcgagcagcagctgtgcgagctgcgctgcgacatggagcgccagaaccacgagtaccag
gtgctgctggacgtgaagacgcggctggagcaggagatcgccacctaccgccgcctgctg
gagggcgaggactcccacctggctactcagtattcctcgtccctggtctcgcagccctct
cgggatgccatggtgacaagccgccaggtgcgcaccattgtggaggaagttcaggacggc
aaggtggtctcctcccgcgagcaggtccaccgctccactcactga

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