Sciurus carolinensis (gray squirrel): 124980116
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Entry
124980116 CDS
T08117
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ncar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
124980116
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124980116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124980116
Ion channels [BR:
ncar04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124980116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4980
DUF2070
Claudin_2
Motif
Other DBs
NCBI-GeneID:
124980116
NCBI-ProteinID:
XP_047401289
EnsemblRapid:
ENSSCRG00010016725
LinkDB
All DBs
Position
3:complement(123898839..123917991)
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AA seq
457 aa
AA seq
DB search
MEPQPLLLFLGLCSVGLVLGSEHETRLLAKLFEDYSKVVRPVEDHRQAVEVTVGLQLIQL
INVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKVHIPSEKIWRPDLVLYNNADGDF
AIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDGSVVAINP
ESDQPDLSNFMESGEWVIKEARGWKHWVFYTCCPSTPYLDITYHFVMQRLPLYFIVNVII
PCLLFSFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNVMFFSTMKRPSRDKQDKK
IFTEDIDISDISGKPGPPPMGFHSPLIKHPEVKSAIEGVKYIAETMKSDQESNNASEEWK
YVAMVMDHILLGVFMLVCLIGTLAVFAGRLIELNQQG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagccccagcctctcctcctgttccttggcctctgctcagttggtcttgtcctgggc
tccgaacatgagacccgtctgttggcgaagctatttgaagactatagcaaagtggtccgg
ccagtggaggaccaccgccaggccgtggaggtcaccgtgggcctgcagctgatacagctc
atcaatgtggatgaagtaaatcagattgtgacaacaaatgttcgtctgaaacagcaatgg
gtggattacaacctaaaatggaatccagatgactatggtggcgtgaaaaaagttcacatt
ccctctgaaaagatctggcggccggacctagttctctataacaatgcagatggcgacttt
gccattgtcaagttcaccaaagtgctcctggactacacgggccacatcacgtggacacca
ccagccatcttcaaaagctactgtgagatcattgtcactcactttccctttgatgagcag
aactgcagcatgaagctgggcacctggacctacgatggctccgtggtggcaatcaacccg
gaaagtgaccagccagacctgagcaacttcatggagagtggggaatgggtgatcaaggag
gcccggggctggaagcactgggtattctacacctgctgccccagcaccccttacctggac
atcacctaccacttcgtcatgcagcgcctgcccctctacttcattgtcaacgtcatcatc
ccctgcctgctcttctccttcttaaccagcctggtgttctacctgcccacagactcaggg
gagaaaatgacgctgagcatctctgtcttactgtccttgaccgtgttccttctggtcatt
gtggagctgatcccttccacctccagtgccgtgcccttgattggaaaatacatgttgttc
accatggtcttcgtcattgcatccatcatcatcactgtcatcgtcatcaacacgcaccac
cgctctcccagcacccacgtgatgcccgagtgggtgcggaaggtttttattgacactatc
ccaaatgtcatgtttttctccacaatgaaaagaccatcgagagacaagcaggacaaaaag
atttttacagaagatattgatatttctgacatttctgggaagccagggcctccgcctatg
ggcttccactctcccctgatcaaacaccccgaggtgaaaagtgccattgagggcgtcaag
tacattgcagagactatgaagtcagaccaggagtccaataacgcttcggaggagtggaaa
tacgtcgcgatggtgatggaccacattctcctcggagtcttcatgctcgtttgtctcatc
ggaactctggcggtgtttgcaggtcggctcattgaattaaatcagcaaggatga
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