Sciurus carolinensis (gray squirrel): 124980195
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Entry
124980195 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin monoglutamylase TTLL4-like
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124980195
04812 Cytoskeleton proteins [BR:
ncar04812
]
124980195
Enzymes [BR:
ncar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
124980195
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
124980195
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
124980195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-GeneID:
124980195
NCBI-ProteinID:
XP_047401478
LinkDB
All DBs
Position
3:164340257..164374981
Genome browser
AA seq
1208 aa
AA seq
DB search
MASAGAEHYSIGLRRGSNFKQRGSSDTVPAPPPEKPSECKVWSQAHQQVKPIWKLERKHV
GTLSAGLGSGLLGVPPQPAYLFCPSTLCSSGTTTVIAGHSSSCYLHSLPDLFSNTLLYRR
SNSRHKPYQQLESFCLRSSRSEKKPFSLPQKSLPVSLTASKTASSTVFPMAQPMASSSTD
PYLLLAAAGESPSRRSLASAISGKIPSPLSSSYKPMLNNNSFMRPSSTKVPLSQAIEGLK
PVSSPKVQPISWRHSGGTGDYAPQPVDHKVPQSTGTVLEHATAHITPATLSTPSSLNTST
TSVASSQYSQNKLALRTEPHPCGLDDNSDSQAPAKEVRFTEAVRKLTAKGFEKIPRQGYQ
FEQSCFVNPSLQWNLLNRSRQWKSVASQQFPQEDAGSDRILPGASDTLGLDSTVFCTKRI
SIHLLASHTSGLSSSPACGSVVDPPPPGEDKTPPIPSPSLQPLGVAEVATHLSSIHLDQP
GKEKLEEGRELGSPARDIGSATNPQPDQVEAEDTEEELIDSLEDCCSHDGNEEEEGDSEC
SSLSAVSPSESVAVISRNCAEILTKPHHSNHEKVVRPALIYSLFPNVPPTIYFGTRDERV
EKLPWEQRKLLRWKMSTVTPNIVKQTIGRSHFKISKRNDDWLGCWGHHMKSASFRSIREH
QKLNHFPGSFQIGRKDRLWRNLSRMQSRFGKKEFSFFPQSFILPQDSKLLRKAWESNSRQ
KWIVKPPASARGIGIQVIHKWSQLPKRRPLLVQRYLHKPYLISGSKFDLRIYVYVTSYDP
LRIYLFSDGLVRFASCKYSPSMKSLGNKFMHLTNYSVNKKNTEYQANADETACQGHKWAL
KALWNYLNQKGVNSDAIWEKIKDVVVKTIISSEPYVNNLLKTYVRHPYSCHELFGFDIML
DENLKPWVLEVNISPSLHSNSQLDINIKGQMIRDLLNLAGFVLPNAEDISSSSSSGSSSS
SSSSGSSLPSSPRDKCRMAPEHFTAQKMKKAYYLTQKIPDQDFYASVLDVLTPDDVRILV
EMEDEFSRRGQFERIFPSRISSRYLRFFEQPRYFNILTTQWEQKYHGNKLKGVDLLRSWC
YKGFHTGVISDSAPLWSLPTSLLTVPKGDGVLSAFYKLEPGKLGKQSSSKGNLFSSEDGT
TPKPKKTQVGLPLFPRKPTSLKDNENTSTEPSPSQKLPVIKYSGRTSRISASSTSQSISD
SLLAAMSP
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcaggagcagagcactacagcattggcctccgccggggaagcaacttcaag
cagcgtggttcctcagacacagtgcctgccccacctcctgagaaaccatcagagtgcaaa
gtctggtcacaggcccatcagcaggtgaagccaatctggaagctggagaggaagcacgtg
ggcacactgtcggcggggttgggctcaggcctcttgggggttccaccccagccagcctat
ttattttgccccagcactttatgtagctctgggaccacaactgtcattgcaggccacagc
agctcctgttacctgcactctctcccagacttgttcagcaataccctgctgtaccgtcgc
tccaatagtaggcacaagccataccagcaactggagtctttctgcttgcgttcaagccga
tcagaaaaaaaacctttttctctccctcagaagagcctccctgtcagtctcactgccagt
aaaaccgcttcttccacggtcttccccatggctcagcccatggcatcctcatccacagat
ccatacctcttactggcagcagctggggaaagcccttcaaggaggagcctggcctctgcc
atctcagggaagatcccgtctccactgtcctcttcctacaagcccatgctgaacaacaat
tccttcatgcggccaagtagcactaaagtgcctttatctcaggctatagagggcctgaag
ccagtatcctcacccaaggtccagcctatctcctggcgtcattcggggggtacaggagac
tatgcaccccagcctgttgatcataaggtgccccaaagcactggcactgtcctagaacat
gccactgcccatatcaccccggctactctgtctactcctagctccctcaacacatccacc
accagtgttgcctcttcccagtatagccagaataaattagccttgaggacagagccacat
ccctgtggtctggatgacaattctgattcccaggctccagctaaagaggttcgtttcaca
gaggctgtgaggaagttgactgcaaaaggttttgagaagataccacggcaaggctaccag
tttgaacagtcttgttttgtgaaccccagcctccagtggaacctcctcaacaggagcagg
cagtggaaatctgtggcgagccagcagtttcctcaggaggatgctggatcagataggatc
ctccctggtgcctcagataccttggggttggacagtacagtcttctgtaccaaaaggatc
agcattcacctccttgcctcacataccagtggactcagttccagccctgcctgtgggtct
gtagttgaccccccaccacctggagaagataaaactcctcctattccctctccttccctt
cagccccttggggtagctgaagtggccacccatctgtcttccatccatctggaccagcct
ggaaaggagaaacttgaggaaggcagggagctgggctcacctgctagggatattggttca
gcaactaacccccagccagaccaggttgaggctgaagatacagaagaagaactaatagac
agtttggaggactgctgcagccatgatgggaatgaagaggaggagggagactcagagtgc
tcctccttaagtgctgtctcccccagcgagtcggtggcagtgatctctcggaactgtgca
gagattcttaccaaacctcatcattccaatcatgagaaagttgtccgaccagcccttatc
tacagtctcttccccaatgtgccccctaccatctattttggcactcgagatgaaagagtg
gagaaactcccctgggagcaaaggaagctcctccggtggaagatgagcacagtgaccccc
aacattgtcaagcagaccatcgggcgatcacacttcaaaatcagcaagagaaatgatgac
tggctgggctgctggggtcaccacatgaagtctgctagtttccgatccattcgagagcat
cagaagctaaaccacttcccaggttctttccagattggaaggaaggaccgactgtggcgg
aacctgtctcgaatgcagagccgctttggcaagaaggagttcagtttcttcccccagtcc
tttatcctgccccaggattccaagctcctgcgcaaagcctgggagagcaacagccgccaa
aagtggattgtgaagccaccggcatcagctcgaggcattggcatccaggtcattcacaag
tggagtcaactccccaagcgcaggcccctcctggtacagaggtatctgcacaaaccctac
ctcatcagtggcagcaagtttgatctgcggatctatgtttatgtcacttcctacgatcct
ctacggatttacctcttttcagatggacttgtccgctttgccagttgcaagtattcccct
tccatgaagagccttggtaacaagttcatgcatctgaccaactacagtgtcaataaaaag
aatactgagtaccaagccaatgcagatgaaaccgcctgccagggtcacaaatgggcgctg
aaggctttgtggaactacctgaaccagaagggagtcaatagcgatgccatctgggagaag
ataaaggatgttgttgtcaaaaccatcatctcatcagagccctatgtcaacaacctgctc
aagacgtatgtgcggcatccctacagctgccacgaactctttggtttcgacatcatgcta
gatgagaacctcaagccctgggtcctggaagtgaatatttccccaagcctccattccaac
tctcaactggacatcaacatcaaaggccagatgatccgggaccttctgaatctggcggga
tttgttctgcccaatgcagaggatatttccagctccagcagctctggcagctccagcagc
tccagcagctccggcagcagcctgcccagctctcccagggacaaatgtcgaatggcacca
gaacattttacagcacagaagatgaagaaagcctattatctcacccagaaaattcctgac
caggacttctatgcatccgtgctggatgtcctgacaccagatgatgttcggattctagtc
gagatggaggatgagttttctcgtcgcggtcaatttgaacgaatttttccttctcgaatc
tcttctcgctatctccgcttttttgagcagccacgctatttcaacattctcaccactcag
tgggaacagaagtaccatggcaacaagctcaaaggagtagatctacttcggagttggtgc
tacaaagggttccacacaggagtcatctctgattctgctccactgtggtctctgccgaca
tcacttctgactgtcccgaagggtgatggagtgctcagtgccttctacaaactggagcct
ggcaagctgggaaagcagagctcctccaagggaaacctattttcatctgaagacgggacc
acgcccaagcccaagaagactcaagttggccttccccttttccccaggaaacccacttcc
ttaaaggataatgagaataccagcacagagcccagcccttcccagaagttacctgtgatc
aagtactctgggcggacttccagaatttctgcttcctccacttcccagtcaatcagtgac
tccctcctggctgctatgagcccatga
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integrated database retrieval system
