Sciurus carolinensis (gray squirrel): 124980211
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Entry
124980211 CDS
T08117
Name
(RefSeq) F-box/WD repeat-containing protein 10-like
KO
K10266
F-box and WD-40 domain protein 10
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124980211
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124980211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
F-box
Beta-prop_IP5PC_F
F-box-like
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
124980211
NCBI-ProteinID:
XP_047401505
LinkDB
All DBs
Position
3:44839746..44890442
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AA seq
1032 aa
AA seq
DB search
MANLEPRLKNAPYFRCEKGNDSVPLCQKCETCILAWKIFSTKEWFRRISSIWQRRFLVSI
LEQLNSLYLLNYFQNILQITQGKDFIYNRSRINLRMEGKAKSSLNQMLDKTVEEKMREIL
YWFGNSTHQTKANYTLLLLQMCDSKLLLTAADVIRVLFLREWNNISELSQDFTDVSFFPE
KDYNPKSKTSHIYWAARLKPTSFPLSKTSGSKTVPEKLEREAPHTVGQWKSTLQCISEMN
RMFSGKTSTFRSEDDPCNLLMDLDDVRDLSCGFSKYRDFIRYLPLHLSKYILRMLDRNTL
NKCAFVSQHWAAMAHQVKMDLNTQTFIQNQIALLQGSYTKGIDPNYANTLSIPIPKIVED
GKRMRAKNPKWKLRTKNDYNLWTAYQNQETQQVQMEERNVFCGTYNIRILSDTWDQNRVI
HYAGGELVAVSSNRKIKLLNILKIKVIPIEFRGHAGSIRTLFLCEEEHFLLSGSYDLSIR
YWDLKTGVCVRIFHGHQGTVTCMDLYKNKLVSGARDCQVKEWDVDTGRCLKTYKHKDPIL
ATRINDTYIVSSCERGIVKVWHLALAQLVKTLTGHDGAVKCLFFDQWHLLSGSADGLVMA
WSMVGKYERCLMAFKHPKEVLHVSLHYLRVISACADGKIRIYNFLNGNCLKVIKTNARGD
PVLSFFFQGNRMVVNTESNILMFQFENIKWQFSMERSKQKKNKEEEKEENSLMDVLSKSS
TQVHSLRDSMSSKQIVTQEFLPNKFKSRILLSSMKLSSDDVEKVQVQGKLETRGELISHL
KTKSWKTPISPDRFLLTVSALQQAHNSGEFAYYPHRPQTKIIDAWGPEISYPRKVLNFKG
KSIQHAVDQLRVNSRPIGVKRTSTPFEIQKLQPNLKKSLHSPRVQSTIPQPMIIRSRFPD
RLKGEDHITSSIEGAVHSMGPLTSMQVIKPNRMLAPQLGMATLSLKREKPRFYTTLDPLR
MNTEFMLLTVKEEKEYGEAMMKEYQAREPTRAADPGKARKAAWIRKIKGLPIDNFMKQGK
TAAPELGRNMFI
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctggaaccaaggctcaagaatgccccctattttcgttgtgagaagggaaac
gattcggtccctttgtgccagaagtgtgaaacatgtatcttagcatggaagatcttttct
accaaagagtggttccggaggatcagcagcatatggcagaggaggtttctagttagcatt
ctggaacagctaaacagcttgtatttgttaaattatttccaaaatatccttcagattacc
cagggaaaggatttcatctataacaggtcccggatcaatctcaggatggaggggaaagcc
aaatcctccttgaaccaaatgttggataaaactgtggaagaaaagatgagggagatcttg
tactggtttggcaacagcacccaccagacgaaggcaaattacactctcttgctactgcag
atgtgcgactccaagttactgctcactgctgctgatgtgatcagagtcctgtttctgaga
gagtggaacaatatctcagagctcagtcaagactttaccgatgtgagttttttccctgag
aaagactacaaccccaagtctaagacttcacatatctactgggctgctagactcaagccc
acatctttccctttgtctaaaacctcaggaagtaaaacagtgcctgaaaagctggagaga
gaagcaccacatactgtgggacaatggaagagtacattgcagtgtatttctgagatgaat
agaatgttttctggaaaaacaagtacatttaggtcagaagatgatccctgcaatctgctg
atggacctggatgacgtcagagatctctcttgtggcttcagcaaataccgggactttatc
cgttacctccctctccatctctccaagtacattctaagaatgctggatagaaacactctg
aacaagtgtgcctttgtgagccagcactgggctgcgatggctcatcaggtcaagatggac
ttgaacacacaaaccttcattcagaaccagattgccctcttgcagggatcctacacaaag
ggaatagatcccaattatgccaacacactttctatcccaattcctaaaatagtagaggac
gggaaacgcatgcgtgccaaaaatccgaagtggaaactgagaacaaagaatgactacaat
ctgtggactgcataccagaatcaggaaactcaacaggtccagatggaggagagaaatgtt
ttctgtgggacctacaatatccgcatcctctctgacacgtgggaccagaacagagtcatc
cattatgctgggggagaattggtagctgtgtcatctaataggaagattaaacttctgaac
atcttaaaaatcaaggtgataccgattgagttccgaggccatgcgggaagtatccgaact
ctcttcctgtgtgaggaggagcactttctcctaagtggtagttatgacctaagtatcaga
tactgggatctgaaaactggggtttgtgtaagaattttccatggccaccagggaacagta
acttgcatggatttgtataagaacaaactcgtatctggagccagagattgccaagtgaaa
gaatgggatgtagacacagggaggtgcctgaagacatataaacacaaagacccaattttg
gccaccaggatcaatgacacctacatcgtaagcagctgtgagcgagggatagtcaaagtg
tggcaccttgccttggcccaactggtaaagactctcactgggcacgatggagctgtgaaa
tgcctattctttgaccagtggcatctcctctcaggaagtgctgatggcttggtcatggcc
tggagcatggtgggaaagtatgagcgatgcctgatggccttcaagcatccgaaggaggtg
ctccatgtgtcccttcactatctccgagtcatcagcgcctgtgcagatggcaagatccgc
atttacaattttctcaatggaaactgtctgaaggtgataaaaaccaatgccagaggtgac
cctgtgctgtccttcttttttcagggcaacaggatggtggtcaacactgagagcaatatt
ctcatgttccagtttgagaatataaaatggcagttctccatggaaagaagtaaacaaaag
aagaataaagaagaggaaaaggaagaaaatagcctcatggatgttctctccaagtctagc
actcaggttcatagcctgagagactctatgtccagtaaacaaatagtgacccaggagttc
ctacccaataaattcaaatcacgcatccttctgagttcaatgaagttatcttcagatgat
gtggaaaaagtacaagtacagggaaaactggaaactcgtggagaattgatcagtcacttg
aagacaaagtcctggaaaacccctatttcacctgatcggtttctcctgactgtcagtgcc
ctacaacaagctcataattcaggggaatttgcctactatccccacaggccccaaaccaaa
atcatagatgcctggggaccagaaatttcatatccaaggaaggtcctgaatttcaaagga
aaatcaatccaacatgcagttgatcagttgagagtcaacagtcgtcccataggtgtgaaa
cgaactagtactccttttgaaatccagaaactgcagcccaacttgaagaagtctttgcat
agtcccagagtccagtccaccataccccagcccatgattatccgctctaggtttcccgac
agattaaagggtgaagaccacataaccagttcaatagaaggggcagtacacagtatgggc
cccctgaccagcatgcaggtcattaagccaaatcgtatgctcgctccccaactgggcatg
gccaccctgtctctcaagagagaaaagcctcgcttttacacaaccctggatccccttcgc
atgaacactgaattcatgctgttgacagtgaaagaggaaaaagagtatggagaagccatg
atgaaggagtatcaggccagggagcccacaagagcagctgatccaggaaaagccagaaaa
gctgcatggatcaggaagatcaaaggtttgcctattgataatttcatgaagcaagggaaa
acagcagcccctgaacttggacgaaatatgtttatttaa
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