Sciurus carolinensis (gray squirrel): 124980221
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Entry
124980221 CDS
T08117
Name
(RefSeq) shugoshin 2-like isoform X1
KO
K11581
shugoshin-like 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124980221
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
Shugoshin
124980221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Shugoshin_C
Tor_FN3_2nd
Motif
Other DBs
NCBI-GeneID:
124980221
NCBI-ProteinID:
XP_047401525
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Position
3:147689911..147720884
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AA seq
1247 aa
AA seq
DB search
MEYPMMEADSITSGIKRLVKDKRISKTKFNVSLASKIKTKIINNSSIFKISLKHNNRALA
QALSREKENSRRITTEKMLLQKEVEKLNFENAFLRLKLNNLNKKLIEIESLMNNNLITAI
EMSSLSEFHQNSFLLPASKKKRISKQCKFMRLPFARVPLTLNDDDDDDDKEKMQSDNKII
SKASPDNLSSVSTGQNLSTQYNLDVSFHKENNQNVYSLDHSEDISSTIDVFPKESHSHSD
QHSKTSLVSEMRNTPSISHIKEKPSATNVNERKKCGSSWETSADTPCVIDLDQQQILSPE
LKWNNEINDHTNEKNITIQRNRQCLPDISSESASKPDAECMSPVQVNDDFELQKTVYDAD
MDLTASDVSKIVTVSRGTKNKSNQKPNDCERKTLRKVKDSSSEKKTERAKRKCKKSSDVD
VEEKFENRPERRSVVLDGKRDSENPDFIHNTEQLTQANILKKITLQNNFDQDDGQSTHYN
KKKKGVHVTNEQQETCPFSQSSHKFLQDSKLDMCQNSLTCNKSKTSTQTFVMHKLETDNL
FPDQKDKETNSENLEVVNEFPRADLSSKDNQNFCDYETQNMLDLKKYVTDMELAQQNESK
INKKLRPKVNRKTEIISEVNQIYEVNNKDVHVPEKDDFFPHTQVVKETFSGKLEVSKEFQ
IPALFMKGNGNILDCETQNILGLQKQITNVYPVQQNESKVNKKLRQKINRRTEIISEVNH
FENDESVHCSEKSNPFFLQKDREIIPGNLKDSGEFQTPILCTKKGGKLCEYETQNVSGMR
RHIHDMQLACQNDSKVHKKLRQKAHRKTEIMSDVNQICENDDKGMHDLGKDNFVSLTPKH
RETVSENLQVANEFPATDFPTKDNGNLCDYEIHNILDLEKHVAHMHLVQQNESKINKKLK
QKINRKTEIISEVNQIYEAHDKDMHDQKSCTEDLDLETNKSEQRLECKGIISGYYMEINN
NEKENCDAIPDPYKLVNKHKKKSGKAKNFLTRDTNKSICQLTDSSLSSLKYITNEADSDP
GNHIELPKNHKKNTVTLNTKRDVPFVEVIKEGKCQVKTVNKMTSKSKKRKTLVEPSPETS
GIMEIISDVDHRKLFDSKQANKENYLENQDIVKIKPDSYTNVFKPLAQIYSPNIQDSSFD
NVHQSSLPLSISSSKNLIIKENFALENLPIFQVSDDVHEKIKEVNQKTGKSGIGNRTLQD
LTNTSLVSNNTAKSENDSEDLSSEPRSRRRCAPVSFKEPSLRKKMRR
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggagtacccaatgatggaagctgattcaattacctcaggaattaagagacttgtgaaa
gacaaaagaatttcaaagactaaatttaatgtttctcttgcttcaaaaatcaaaacaaaa
ataatcaataattcaagtatttttaagatttctctaaagcacaataatagagcattagct
caggctcttagtagagaaaaagagaattctagaagaattacaactgaaaagatgcttttg
caaaaagaagtggagaaactgaattttgagaatgcatttcttcgcctaaagctaaataac
ttgaataagaagcttatagaaatagaatcactcatgaataataacttaataactgcaatt
gaaatgagcagtctttctgagttccatcaaaattcttttcttctgccagcaagtaagaag
aaacggattagtaaacagtgcaaattcatgcgtcttccatttgcaagggttccattaact
ttgaatgatgatgatgatgacgatgataaagagaaaatgcagagtgacaacaaaattata
tcaaaggcatcacctgataatctttcttcagtatcaacaggacaaaatttatcaactcag
tataatttggatgtgtcttttcataaagaaaataatcagaatgtatatagtttagatcat
tcagaagatatttcttctaccattgatgtatttcccaaagaaagccattcccattcagac
caacattctaagacttcactagtgagtgagatgagaaataccccatctattagccacata
aaggagaaaccatctgctactaatgtgaatgaaaggaagaagtgtgggtcatcttgggag
acttctgcagacactccctgtgtgatagatttagatcagcagcagattttaagtccagaa
ctaaaatggaataatgagataaatgatcatactaatgaaaaaaatattacaatacaaaga
aatagacagtgccttcctgacatatcttctgagtctgccagcaaacctgatgcagaatgc
atgagtccagttcaggttaatgatgactttgagttgcagaaaactgtgtatgatgctgac
atggatttaactgctagtgatgtgagcaaaattgttacagtgtcaagaggcactaaaaat
aaaagtaatcaaaaaccaaatgattgtgaaaggaaaactttgagaaaagtaaaagattca
agctctgaaaaaaagacagaaagagcaaagagaaaatgcaaaaagagttcagatgtggat
gttgaggaaaagtttgaaaacagaccagaaagaagatctgttgtcctcgatggcaaaagg
gattcagaaaatccggattttattcacaatactgaacagctgacacaggcaaacatactg
aagaaaataacccttcagaataactttgatcaagatgacggacaaagtacacactataat
aaaaagaagaaaggagtgcatgtaacaaatgagcagcaggaaacttgccctttctcccaa
agttcacataaattcctacaggacagcaaattggatatgtgtcaaaattctctaacttgt
aataaaagtaaaacttctacacagacatttgtaatgcacaagttagaaacagataactta
ttcccagaccaaaaagataaagaaaccaattctgaaaacctagaagttgtaaatgaattt
ccaagagctgatctttcctccaaagataatcaaaatttttgtgactatgagacccagaat
atgttggatttgaaaaaatatgtcactgatatggaacttgctcagcaaaatgaatcaaaa
ataaataagaagcttaggcccaaagtaaataggaaaactgaaataatttctgaagtaaac
caaatatatgaggttaataataaagatgttcatgtcccagaaaaagatgacttttttccc
cacactcaagtggttaaagagactttttctggaaaactagaagtttcaaaagagtttcaa
atacctgctcttttcatgaaaggtaatggaaatatacttgattgtgagacccaaaatata
ttgggtttgcaaaaacagatcaccaatgtgtaccctgttcaacaaaatgagtcaaaagtt
aataaaaagcttaggcagaaaataaaccggaggacagaaataatttctgaagtgaatcat
tttgaaaatgatgaaagtgtgcattgctcagaaaaaagtaatcctttcttcctacaaaag
gatagagaaatcatccctggaaacctaaaagattcaggcgagtttcaaacacctattctt
tgtaccaaaaagggtggaaagctatgtgagtatgagactcaaaatgtttctgggatgaga
aggcatatccatgatatgcagcttgcttgtcagaatgattcaaaagtacacaagaagctt
agacaaaaggcacatcgaaagacagaaataatgtctgatgtcaaccaaatatgtgagaat
gatgacaaaggtatgcatgacctaggaaaagataactttgtttctttaaccccaaagcat
agagaaaccgtttctgaaaacctacaagttgcaaatgaatttccagcaactgattttccc
accaaagataatggaaatttatgtgactatgagatacacaatattttagatttggaaaag
catgttgctcatatgcatcttgttcaacaaaacgaatcaaaaataaataagaagcttaag
cagaaaataaataggaagactgaaataatttctgaagtgaaccagatatatgaggctcat
gataaggatatgcatgaccaaaaaagctgtacagaagatcttgatttggaaacaaacaaa
tctgaacaaagacttgaatgcaaaggcattatcagtggatattatatggaaatcaacaat
aatgaaaaggaaaattgtgatgcaattccagatccttataaacttgttaacaaacataag
aaaaaatcaggcaaggcaaagaactttttgacaagagatacgaacaaatctatttgtcag
ttaacagattcttcactgtctagtttaaaatatattactaatgaagcagattctgatcct
ggaaaccatattgagctacctaagaatcacaagaaaaacactgtaactttgaatacaaaa
agagatgtcccttttgtggaagtgataaaagaaggtaagtgccaggtcaaaacagtaaat
aaaatgacatccaaatcaaagaaaaggaagacccttgtagagccttctccagagaccagt
ggaataatggagataatatctgacgttgatcacagaaagttatttgactccaaacaagct
aataaagaaaactacttggaaaatcaggatattgtcaaaattaagccagactcttacaca
aatgtgtttaaacctttagctcagatatattcacctaatatacaagattcttcctttgac
aatgttcatcagagttcattacctttgagtatttcttccagtaaaaacctgataataaaa
gaaaattttgccttggagaatttacccatctttcaagtaagcgatgatgtgcatgagaag
ataaaagaagtcaaccagaaaacaggaaaatcaggaataggtaacagaacattacaggac
ttgacaaataccagtttagtttcaaataacactgctaaatccgaaaatgactcagaagat
ctatcttcagaacctcgaagcagaaggaggtgtgctcctgtcagtttcaaagaaccaagt
ctcagaaaaaagatgagaagataa
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