Sciurus carolinensis (gray squirrel): 124980222
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Entry
124980222 CDS
T08117
Name
(RefSeq) tetratricopeptide repeat protein 30A-like
KO
K19683
tetratricopeptide repeat protein 30
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124980222
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124980222
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_16
TPR_CcmH_CycH
TPR_Slam
ANAPC3
TPR_14
TPR_8
SRP_TPR_like
ARM_TT21_C
TPR_6
Motif
Other DBs
NCBI-GeneID:
124980222
NCBI-ProteinID:
XP_047401527
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All DBs
Position
3:complement(126416838..126419546)
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AA seq
665 aa
AA seq
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MAGLSSAQIPDGEFTAVVYRLIRYSRYAEAVQLLGAELQRSPRSRAGLSLLAYCYYRLQE
FALAAECYEQLSQLHPELEQYRLYQAQALYKACLYPEATRVAFLLLDNPAYHSQVLRLQA
AIKYSEGDLPGARSLVEQLLSGEGGEESGSENEPDGQVNLGCLLYKEGHYEAACSKFFAA
LQSSGYQPDLSYNLALAYYSSRRYAPALKHIADIIEHGIRQHPELGVGMTTEGIDIRSVG
NTLVLHQTALVEAFNLKAAIEYQLRNYEVAQETLTDMPPRAEEELDPVTLHNQALMNMDA
KPTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYD
FLDAMITCQTAPEEAFIKLDGLAGMLTEQLRRLTKQVQEARHRRDEETVKKAVNEYDDTL
EKYIPVLMAQAKIYWNLENYSMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIG
FYEPIVKKHYGNILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYDDPDRKI
YHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYSKKLGTDTWYYAKRCFLSLLENMSKH
MIVLRDNVIQECVQFLEHCELYGRNIPAVIEQPLEEERMHIGKNTVTYESRQLRALIYEI
IGWNI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgagcagcgcccagatccccgacggggagttcaccgccgtcgtgtaccgg
ctcatccgctactcccgctacgccgaggcggtgcagctgctgggcgcagagctgcagcgg
agccccaggagccgcgccggcctgtcgctgctggcctactgctactaccgcctgcaggag
ttcgcgctggccgcggagtgctatgagcagctgagccagctgcacccggaactcgagcag
taccgcctgtaccaggcccaagccctgtacaaggcctgcctttatccagaggccacccgg
gtcgccttccttctcctggacaaccctgcctaccacagccaggtcttgcgcctgcaagct
gctatcaagtacagtgagggtgaccttccaggggccaggagcctggtggagcagctgctc
agtggggaagggggagaagagagtggaagtgagaatgagccagacggtcaggtcaacttg
ggttgtttgctgtacaaggagggacactatgaagctgcctgctctaagttctttgcagcc
ctgcagtcttcaggctaccagcctgacctttcctacaatctggcactggcctattatagt
agcagacgctatgccccagctctgaagcatattgctgacattattgagcatgggatccgt
cagcacccagaacttggtgtgggcatgaccactgaaggcattgatattcgaagtgttggc
aacactttagtcctccaccagactgctctggtggaagccttcaacctcaaggcagccata
gaataccaactgagaaactatgaggtagcccaagaaacccttactgacatgccacctaga
gcagaggaagagttggaccccgtgaccctgcacaaccaggcactcatgaacatggatgcc
aagcctacagaagggtttgagaagctacagtttttgctccaacagaaccccttcccccca
gagacttttggcaacctcttgctgctctactgtaagtatgagtattttgacctggcagca
gatgtcctggcagaaaatgcccatttgacttataagttcctcacaccctatctctatgac
ttcttggatgccatgatcacttgccagacggctcctgaagaagctttcattaaacttgat
ggcctagcaggaatgctgactgagcagcttcgaagactcaccaaacaagtacaggaagca
agacacagaagagatgaagaaactgtcaaaaaggcagtgaatgaatatgatgacactctt
gagaaatatattcctgtgttgatggcccaggcaaagatctactggaatcttgaaaattat
tcaatggtagaaaagattttccgcaaatctgtggaattctgtaatgaccatgatgtgtgg
aagttgaatgtggctcatgttctgttcatgcaggagaacaaatacaaagaagccattggt
ttctatgaacccatagtcaagaagcattatggtaacatcctgaatgttagcgctattgta
ttagcaaacctctgtgtttcctatattatgacaagtcaaaatgaagaagcagaagagttg
atgaggaagattgaaaaggaggaagagcagctgtcctatgatgaccctgacaggaaaatc
taccatctctgcattgtgaatttggtgataggaacactttattgtgccaaaggaaattat
gactttggtatctctcgagttatcaaaagcttggaaccttacagtaaaaagctgggaacg
gatacctggtactatgccaaaagatgtttcctgtccttattagaaaacatgtcaaagcac
atgatagtgcttcgtgacaatgttattcaagaatgtgtgcagtttctagaacactgtgag
ctttatggcagaaacatacctgctgttatagaacaacccctggaagaagaaagaatgcat
attggaaagaatacagtcacatatgaatctagacagttaagagctttgatttatgagatt
ataggatggaatatatag
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