Sciurus carolinensis (gray squirrel): 124980267
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Entry
124980267 CDS
T08117
Name
(RefSeq) arachidonate 12-lipoxygenase, 12R-type
KO
K08021
arachidonate 12-lipoxygenase (R-type) [EC:1.13.11.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00590
Arachidonic acid metabolism
ncar01100
Metabolic pathways
ncar04382
Cornified envelope formation
ncar04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
124980267
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
124980267
09158 Development and regeneration
04382 Cornified envelope formation
124980267
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
124980267
NCBI-ProteinID:
XP_047401614
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All DBs
Position
3:51673382..51685418
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AA seq
701 aa
AA seq
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MATYKVKVATGTDFLSGTLDSISLTIVGTQGESHKQLLNHFGRDFATGAVDEYTIQCQQD
LGELIIIRLHKERYSFFRKDPWYCNYVQICAPNGRVYHFPAYQWMDGYETLALREATGKT
MADDSLPILLEHRQEEIRAKQDFYHWRVFVPGLPNYVHIPSYHPPVRRFRNPNRPEWNGY
IPGFPILINIKATKFLNSNLRFSFIKTASFFFRLGPMSLAFKLRGLVDSKRSWKRLKDIK
KIFPANKTVISEYVAEHWTEDTFFGYQYLNGINPGLICRCRRIPDKFPVTDDMVAPFLEE
GTCLQAELEKGNIYLADYRILEGIPTVELNGQKQHHCAPLCLLYFNPQGNMMPIAIQLSQ
TPGPDCPIFLPSDSEWDWLLAKTWVRYAEFYSHEAISHLLETHLIAEAFCLALLRQLPMC
HPLYKLLIPHTRYTVQINSIGRALLLNEGGLSARAMSLGLEGFAEVMVRALSELTYDSLY
VPNDFVERGVQDLPGYYFRDDSLAVWDAMERYVTEIITYYYPSDAAVEGDPELQSWVQEI
FKECLLGRESSGFPTCLRTVPELIRYVTIVMYTCSARHAAVNTGQLEYTAWMPNFPSSMR
NPPMQAKGLTTLETYMDTLPDVKTTCIVLLVLWTLSREPDDKRPLGHFPDIHFVEEVPRR
SMEAFRQRLSQISHNIRQRNKCLAVPYYYLDPVLIENSISI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggccacctacaaggtgaaggtggccacaggcactgacttcttgtcgggaaccctggac
tccatctcgctgaccatcgtggggacccaaggagagagccataagcagttgctgaaccac
tttgggagagactttgccactggggcggtggatgagtacactatccagtgccaacaggac
ctgggggagctcatcatcatccgcctgcacaaagaacgctactccttcttccgcaaggac
ccctggtactgcaactatgtgcaaatctgtgcccccaatggccgcgtctaccacttccct
gcctaccagtggatggatggctatgagaccctggcacttagggaggccacaggaaagaca
atggcggatgactcactccccatccttctggaacacagacaagaagagatcagagccaag
caggacttctaccattggagagtctttgttcctggcctgcccaactacgtgcatattccc
agttaccaccctcctgtccggcgattccgcaaccccaaccggcctgagtggaatggttac
attccaggatttccgattctcatcaacattaaggccaccaagttcctgaactcaaatctc
cgtttctcattcatcaagacagcctccttcttcttccgcctggggcccatgtcgctggca
ttcaaactccgtggcctggtagactcaaaacgttcatggaagaggctaaaggacattaag
aaaattttccctgccaacaagactgtcatctctgagtatgtggctgagcactggacagag
gacactttctttgggtaccagtacctcaacggcatcaacccaggactgatatgccgatgt
aggaggatcccagacaagtttcctgtcacagatgacatggtggccccattcctggaagag
ggaacatgcctgcaagcagagctggagaaggggaacatttacctggcagactaccgcatc
ttggagggcatccccaccgtggagctcaacggccagaagcagcatcactgtgccccgctc
tgcctgctgtacttcaatccccagggcaacatgatgcccatcgccatccagctgagccag
acccctggacctgattgccccatcttcctgcccagcgattctgagtgggactggctgctg
gccaagacgtgggtgcgctatgctgagttctacagccacgaggccatctcccacctgctg
gagacccacctcatcgctgaggccttctgcctggccctgttgaggcaactacccatgtgc
caccccctatacaagcttctcattccccatacccgctacaccgtccagatcaacagcatc
gggcgggcccttctcctcaatgaggggggcctctctgccagggccatgtccctgggcctg
gagggctttgctgaggtgatggtgcgggctctgtctgagctcacctacgacagcctctat
gtccccaatgactttgtggagcgtggggtccaggacctgcctgggtattatttccgtgat
gacagcttggcagtatgggatgcaatggagaggtatgtgacggagatcatcacctattat
tatccaagtgacgcagctgtggagggtgacccggaattgcagtcctgggtgcaggagata
ttcaaggagtgcctcctagggcgtgagagctcaggcttccccacgtgcttgcgaaccgtg
cctgagctgatccggtatgtcaccatcgtcatgtacacctgctcggcccggcacgcagct
gtcaacacaggccagctggagtacaccgcctggatgcccaacttcccatcctccatgcgg
aacccgccaatgcaggccaaggggctgaccacgctggagacctacatggacacattgccg
gatgtgaagaccacttgcattgtactcttggtgctctggaccctcagtcgtgaacctgat
gacaagcggcccttgggccacttcccggacattcactttgtggaggaggtcccgaggcgg
agcatggaggccttccgccagcgcctgtcccagatctcacacaacatccgccagcgcaat
aagtgtctcgctgtcccctactactacttggacccagtgctgatcgagaacagcatttct
atctag
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