Sciurus carolinensis (gray squirrel): 124980311
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Entry
124980311 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: V-type proton ATPase subunit B, brain isoform-like
KO
K02147
V-type H+-transporting ATPase subunit B
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00190
Oxidative phosphorylation
ncar01100
Metabolic pathways
ncar04142
Lysosome biogenesis
ncar04145
Phagocytosis
ncar04150
mTOR signaling pathway
ncar04721
Synaptic vesicle cycle
ncar04966
Collecting duct acid secretion
ncar05165
Human papillomavirus infection
ncar05323
Rheumatoid arthritis
Module
ncar_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
124980311
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124980311
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124980311
04142 Lysosome biogenesis
124980311
09150 Organismal Systems
09155 Excretory system
04966 Collecting duct acid secretion
124980311
09156 Nervous system
04721 Synaptic vesicle cycle
124980311
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124980311
09163 Immune disease
05323 Rheumatoid arthritis
124980311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124980311
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124980311
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
ATP-synt_VA_C
ATP-synt_ab_N
SH3_VIII-1_N
Motif
Other DBs
NCBI-GeneID:
124980311
NCBI-ProteinID:
XP_047401698
LinkDB
All DBs
Position
3:181951318..181953345
Genome browser
AA seq
511 aa
AA seq
DB search
MALRAMRGIVNRAAPELPVSTSGPVAGSREQALAVSRNYLSQPRLTXKTVSGVNGPLVIL
DQVKFPRYAEIVHLTLPDGTKRSGQILEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR
TPVSEDMLGRVFNGSGKPIDRGPSVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM
NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET
AWFFKSDFEENGSMDNACLFLNLTNDPTIERIITPRLALTTAEFLAYQCEKHLLVILTDM
SSYAEALQEVSAARDEVPGRRGFPGYMYTDLATIYKRAGRVEGRNGSITQIPILTMPNDG
ITHSIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN
QLYTCYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFITQGPYENRMVYETLNIG
WQLLRIFPKEMLKQIPQSTLSEFYPRDSAKH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcgggcgatgcgggggatcgtgaacagggccgcacccgagctacccgtgtcc
accagtggtccggtggcaggatctcgggagcaggcgctggcagtcagtcggaactacctc
tcccagcctcgcctcacatagaagacagtttcaggagtcaatggtccactggtgatctta
gatcaagttaagtttcccagatatgctgagattgtccacttgacgttaccagatggcacg
aagagaagtgggcagattctagaagttagtggttccaaagcagtggttcaggtatttgaa
gggacttcaggtatagatgccaagaaaacgtcctgtgagtttactggggatattctcaga
acaccagtgtctgaggatatgcttggccgggtgttcaatgggtcaggaaaaccgatcgac
agaggtccttctgtactggctgaagacttcctcgacatcatgggtcagcccatcaatccg
cagtgtcgaatctatccagaggagatgattcagactggcatttctgccatagatggcatg
aacagtattgcccggggccagaaaattccaatcttctctgctgctgggttgccacacaat
gagattgcagctcaaatctgtcgccaggctggtttggtaaagaaatccaaagatgtggtg
gattacagtgaggaaaattttgccattgtatttgctgctatgggtgtaaacatggaaact
gcctggttcttcaaatctgactttgaagaaaatggctcaatggacaatgcctgcctcttt
ttgaacttgaccaatgacccaactattgaacgaattatcactcctcgcctggctctgacc
acagccgagttcctagcgtaccagtgtgagaaacacttgttggttatcctgacagacatg
agctcttatgctgaggccctgcaagaggtttcagcagccagggacgaggtccctggtcga
cgaggtttcccaggctacatgtacacagatttagccacgatatacaagcgtgctggtcga
gtggaaggtcgaaatggctctattactcaaatccctattcttaccatgcccaatgatggt
atcactcactccatccctgacctgacggggtatattacagaggggcagatctatgtggac
agacagctgcacaacagacagatttacccacctattaatgtactgccctcactctcacgg
ttaatgaagtctgctattggagaaggtatgaccagaaaggatcacgctgatgtatctaac
cagctgtacacctgctacgctatcgggaaggatgtgcaagccatgaaggcagtggtggga
gaggaagcccttacctcagatgaccttctgtacttggaatttctgcagaagtttgagagg
aactttattactcagggtccttatgagaaccgcatggtttatgagactttgaacattggc
tggcagctgctccgaatcttccccaaagaaatgctgaagcaaatcccccagagcaccctg
agcgaattttaccctcgagattctgcaaagcactag
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