Sciurus carolinensis (gray squirrel): 124980408
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Entry
124980408 CDS
T08117
Name
(RefSeq) rab11 family-interacting protein 4 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124980408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124980408
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124980408
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
bZIP_2
EF-hand_8
bZIP_1
EF-hand_9
Shugoshin_N
Leu_zip
VGPC1_C
DUF7801
Motif
Other DBs
NCBI-GeneID:
124980408
NCBI-ProteinID:
XP_047401880
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Position
3:65981576..66095467
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AA seq
639 aa
AA seq
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MAGGAGWAGAPAALLRSVRRLREVFEVCGRDPDGFLRVERVAALGLRFGQGEEVEKLVKY
LDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSMESAGTLPCASEIPDCVEQDSEVPGST
FADGELIPREPVVFPEDEEEVMMTLAPPEGSQESDMDSPMESTQSLEGSVGSPAEDKERG
LGGLFLPEDKSLVHTPSMTTSDLSTHSTASLISNEEQFEDYGEGEDVDCAPSSPCPDDET
RTNVYSDLGSSVSSSAGQTPRKMRHPYNSELLDVYCSQCCKKINLLNDLEARLKNLKANS
PNRKISSTAFGRQLMHNSNFSSSNGSTEDLFRDSIDSCDNDITEKVSFLEKKVTELENDS
LTSGDLKSKLKQENTQLVHRVHELEEMVKDQETMAEQALEEEARRHREAYSKLEREKSTE
LELLNTRVQQLEEENTELRTTVTRLKSQTEKLDEERQRMSDRLEDTSLRLKDEMDLYKRM
MDKLRQNRLEFQKEREATQELIEDLRKELEHLQMYKLDCERQGRGRGSASGLGEFSARAR
EVELEHEVKRLKQENHKLRDQNDDLNGQILSLSLYEAKNLFATQTKAQSLAAEIDTASRD
ELMEALKEQEEINFRLRQYMDKIILAILDHNPSILEIKH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggcgcgggctgggcgggcgcccccgcggctctgctgcgctccgtgcgccgc
ctgcgcgaggtgttcgaggtgtgcggccgcgaccccgacggcttcctgcgtgtggagcgc
gtcgccgcactcggactgcgcttcggccagggcgaggaggtggaaaaacttgtgaaatat
ctggatcccaacgacctggggagaatcaacttcaaggacttttgccgtggcgtgttcgcc
atgaaagggtgcgaggagctgctgaaggacgtgctgtccatggagagtgcagggacgctg
ccatgtgcatcagagatcccagactgtgtggagcaggacagtgaggttccaggctccacc
tttgctgatggcgagctcatccccagggagcctgtcgtctttcctgaggacgaggaggag
gttatgatgacactggccccacctgagggttcccaggagtcagatatggacagccccatg
gagagcacccagagcctggaggggtctgtcgggagtcctgccgaggacaaggagcggggt
cttgggggcctgtttctgccagaggacaagtccctggtccacactccatccatgacgacg
tcagacctctccacacactccaccgcctcgctcatcagcaatgaggagcagtttgaagac
tacggggagggggaggacgtggactgtgcccccagcagcccctgccccgacgatgagacc
aggaccaacgtctactcggacctggggtcttcagtgtcttccagtgcggggcagacgccg
aggaagatgcggcacccctacaacagtgagttgctggacgtgtactgctctcagtgctgc
aagaagatcaacctgctgaatgacttggaagcccgcctgaaaaacctcaaggccaacagc
cccaaccgaaaaatctctagcacagcctttggacggcagctcatgcacaacagtaacttc
agcagcagtaacggcagcactgaggacctgttccgggacagcattgactcctgtgacaat
gacatcacagaaaaggtgagcttcctggaaaaaaaggtgacagagctggagaatgacagc
ttgaccagtggggacctgaagagcaagctaaaacaggagaacacacagctggtgcacagg
gtgcacgagctggaggagatggtgaaggatcaggagaccatggctgagcaggcactggaa
gaggaggcccggcgacatcgggaagcctacagcaagctggagcgggagaagagcactgag
ctggagctgctcaacaccagggtgcaacaattagaggaagaaaatactgagctcaggacg
acggtgacgcggctcaagtcacaaactgagaaactggatgaggagcggcagcgcatgtct
gaccggctggaggacaccagcctgcggctcaaggacgagatggacctgtacaaacgcatg
atggacaagctgcggcagaaccgcctggagttccagaaggagcgggaggctacgcaggag
ctcatcgaggacttgcgcaaggagctggagcacctgcagatgtacaagctggactgtgaa
cggcagggcaggggccgcggctcggcatccggcctgggcgagttcagtgccagggcccgg
gaggtggagctggagcatgaggtcaagcggctaaagcaggagaaccataagttgcgggat
cagaatgacgacttgaatggacagatcctgagcctcagcctctatgaagcaaagaacctc
tttgctacccagaccaaagcccagtctctggctgcagaaattgacacagcctctcgagat
gagctaatggaagccctaaaagaacaggaggagatcaacttccggctgaggcagtacatg
gacaagattatcctggccatcctggaccacaacccctccatcctggagatcaagcactga
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