Sciurus carolinensis (gray squirrel): 124980421
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Entry
124980421 CDS
T08117
Name
(RefSeq) PHD finger protein 12 isoform X1
KO
K26244
transcriptional regulatory protein PHF12/RCO1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124980421
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
124980421
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Ortholog
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GFIT
Motif
Pfam:
PHF12_MRG_bd
PHD
PHDvar_NSD
FHA
PHD-1st_NSD
PHD_2
Motif
Other DBs
NCBI-GeneID:
124980421
NCBI-ProteinID:
XP_047401907
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All DBs
Position
3:64346494..64389538
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AA seq
1004 aa
AA seq
DB search
MWEKMETKTIVYDLDTSGGLMEQIQALLAPPKSDEAEKRSRKPEKEPRRSGRATNHDSCD
SCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQKKELGHVNG
LVEKTGKRTTSPSSDTDLLDRSASKTELKAIAHARILERRASRPGTPTSNASTETPTSEQ
NDVDEDIIDVDEEPVAAEPDYVQPQLRRPFELLIAAAMERNPTQFQLPNELTCTTALPGS
SKRRRKEETTGKNVKKTQHELDHNGLVPLPVKVCFTCNRSCRVAPLIQCDYCPLLFHMDC
LEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSNRCQVFDRFQDTISQHVVKVDFLNRIHK
KHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPLIAPAAIRDGELICNGIPEESQTHLLNS
EHLATQAEQQEWLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSITTSL
QTADKAPTPSHYPLSCPSGISTQNSLSCSPPHQPPALEDISCSSCAEKSKKAPCGTANGP
VNTEVKANGPHLYSSPTDSTDPRRLPGANTPLPGLSHRQGWPRPLTPPAAGGLQNHTVGI
IVKTENATGPSSCPQRSLVPVPSLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPL
GSPPNATRVLTPPQAAGDGILATGANQRFCSPAPSSDGKVSPGTLSIGSALTVPSFPANS
TAMVDLTNSLRAFMDVNGEIEINMLDEKLIKFLALQRIHQLFPSRVQASPGSVGTHPLTS
GGHHTEVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNYGHCNYVSGKH
ACIFYDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTPPSSIVAKVQSVIRRRRHQK
QDEEPSEEAAMMSSQAQGPPRRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQF
VFSITEFATKQPKGDASLLQDGVLAEKLSLKPHQGPVLRSNSVP
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagaaaatggagaccaagacgatcgtgtacgacttggatacgtctggggggctg
atggagcaaatccaagctctgctggctccccccaagtccgacgaggcagaaaagcggagt
cggaagccggagaaggagccccggagaagcggcagggccaccaaccacgacagctgcgat
agctgcaaggaaggtggagatctcctgtgctgcgaccactgcccggccgccttccacctc
cagtgctgtaaccctccactgagtgaagagatgttgcctcctggggagtggatgtgtcac
cggtgcactgttcgccgaaagaaacgagagcagaaaaaggagctgggccatgtcaatgga
ctggtggaaaaaactggcaaacggactacatcacccagcagtgacactgacttgttggac
agatcagctagcaaaactgaactcaaggccattgcccatgcccggattctggaaaggaga
gccagccggcctggcacccccacatccaacgccagcacagagacccccacctctgagcag
aacgacgttgatgaggacatcattgacgtggatgaggagccagtagcagcagagccggac
tatgtgcagccccagctgaggcggccttttgagctgctcattgctgccgctatggagcgg
aaccccacccaatttcagttacccaatgaactgacttgtaccactgcactaccaggttct
agcaagaggagaagaaaggaggaaaccacagggaaaaatgttaagaagacacaacatgag
ttagatcacaatggtcttgttcccttacccgtcaaagtctgcttcacatgtaacaggagc
tgccgtgtggcccctctcatccagtgtgactattgccccctcctgtttcatatggactgc
ctcgaaccaccgctcactgccatgcccctgggcagatggatgtgtccgaatcacatcgaa
catgtggtgctgaaccagaagaatatgacactgagcaatcggtgccaggtgtttgatcgt
ttccaggacaccatttcacagcatgtcgtcaaagtggacttcctgaaccgaatccataag
aagcaccctcctaaccgccgcgtgctccagtcagtcaaaagaagaagcctaaaggttcct
gatgctataaaatctcagtaccagtttccaccccctctcattgcacccgcggccattcgg
gacggggaactgatctgcaatgggattcccgaggaatcacagacgcaccttttgaactct
gagcacttagccacccaggcagaacagcaagagtggctctgtagtgttgttgcgctccag
tgcagcatattgaaacatttatctgctaagcagatgccttcgcattgggactctgaacag
acagagaaggctgatattaagcctgttattgtgactgacagctcaatcaccacatccctg
caaacagctgacaaggcacctacaccttcccactaccccttgtcctgcccctcagggatt
agcacccagaattccctgagctgctctccaccccaccagcccccagccctagaggacatc
agctgcagttcttgtgcggaaaaatccaagaaagccccttgtgggactgccaacgggcca
gtgaacacagaggtgaaagccaatggcccccacctctacagcagccccactgattccacg
gacccccggcgacttccaggcgccaacacccctctacctggcctttcacatcggcaaggc
tggcctcggcccctcacgccaccagcggctggggggcttcagaatcacaccgtcggcatc
attgtgaagacagagaatgccactggccccagctcttgcccccagaggagtttggttcct
gtcccaagcctgcccccttccattcccagctcttgtgccagcatcgagaacaccagcact
ttgcaaagaaagactgtccaatcacagataggacctccgttgacagattcaaggccactg
ggctcacccccaaatgccacccgggtgctcactcccccacaagcagcaggagatggtatc
ttggctacaggagccaaccagcgattctgctcaccagcgccatcatcagatggcaaggtc
agccccggcacgttatccataggaagcgctttaaccgtaccctctttcccagccaactct
actgccatggtggacctcaccaattcacttcgagcatttatggatgtcaatggagaaatc
gagataaatatgctggacgagaagctgatcaagtttctggccttgcagagaatacatcag
cttttcccctcccgggtccaggcttcaccgggcagtgttgggacacatccactgacttcc
ggagggcaccacacagaagtgcaaagaaaggaggtacaggcccgagctgtgttctacccc
ctcttagggttgggaggagctgtgaacatgtgctatcgaaccctctacatcgggacagga
gctgacatggatgtgtgccttacaaactatggtcactgtaactacgtgtccgggaaacat
gcctgcatattctacgatgagaataccaaacattatgagctgttaaactacagtgagcat
gggacaacggtggacaatgtgctgtattcgtgtgacttctctgagaagaccccgccaacc
cccccaagcagtattgttgccaaagtgcagagtgtcatcaggcgccgccgccaccagaaa
caggatgaagagccaagtgaggaggcagccatgatgagttcccaggcccaggggccacca
cggagaccctgcaattgcaaagccagcagctcaagcttgattgggggcagtggggccggc
tgggagggcacggccttactgcaccatggcagctacatcaaactgggctgcctgcagttt
gtcttcagcatcactgagtttgcgaccaaacagcccaaaggcgatgccagcctgctgcag
gatggggtcttggcggaaaagttgtctctcaagccccaccagggccctgtgctgcgctcc
aactccgttccctag
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