Sciurus carolinensis (gray squirrel): 124980436
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Entry
124980436 CDS
T08117
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124980436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124980436
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Axon guidance molecules
124980436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
124980436
NCBI-ProteinID:
XP_047401941
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All DBs
Position
3:complement(50631652..50811030)
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AA seq
604 aa
AA seq
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MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCTDENGHPRRCIPDFVNAAF
GKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCW
QSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQ
CRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDD
SLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS
GRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCESYCKASK
GKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSR
DIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgcagtgtgggaggcgctggctgcgctggcggctgtggcgtgcctggtgggc
gcggtgcgcggcgggcccgggctcagcatgttcgctggccaggcggcgcagccggacccc
tgcacggacgagaacggccacccgcgccgctgcatcccggactttgtcaatgcggccttc
ggtaaggatgtgcgtgtgtccagcacctgcggccggcccccagcgcgctactgcgtggtg
agcgagcgcggcgaggagcggctgcgctcgtgccacctctgcaacgcgtccgaccccaag
aaggcgcatcctcccgccttcctcaccgacctcaacaacccgcacaacctgacgtgctgg
cagtcggagaactacctgcagttcccacacaatgtcacgctcacgctgtctctcggcaaa
aagttcgaggtgacctacgtgagcctgcagttctgctcgccacggcccgagtccatggcc
atctacaagtccatggactacgggcgtacgtgggtgcccttccagttctactccacgcag
tgccgcaagatgtacaaccggccacaccgcgcgcccatcaccaagcagaacgagcaggag
gccgtgtgcaccgactcgcacaccgacatgcgcccgctttcgggcggcctcatcgccttc
agcacgctggatgggcggccctctgcgcacgacttcgacaactcgccagtgctgcaggac
tgggtcactgccaccgatatccgcgtggccttcagccgcctgcacacgtttggcgacgag
aacgaggacgactcggagctggcgcgcgactcgtacttctatgccgtgtcggacctgcag
gtgggcggccgctgcaagtgcaacggccacgcggctcgttgcgtgcgcgaccgcgacgac
agcctggtgtgcgactgcaggcacaacacggccggcccggaatgcgaccgctgcaaacct
ttccactatgatcggccctggcaacgcgccacagcccgcgaggccaacgagtgcgtggcc
tgtaactgcaacctgcatgcccggcgctgccgcttcaacatggagctctacaagctgtct
gggcgcaagagtgggggcgtctgcctcaattgccgccacaacaccgctggccgccattgc
cactactgcaaggagggctactaccgagacatgggcaagcccatcacccaccggaaggcc
tgcaaagcctgtgattgccaccccgtgggcgctgctggcaagacctgcaaccaaaccact
ggccagtgtccctgcaaggacggcgtgacgggcatcacctgcaaccgctgcgccaagggc
taccagcagagccgctctcctatcgccccctgcatcaagattcctgtagcgccaccaacc
acggcagccagcagcgtggaggagcctgaagactgcgagtcctactgcaaggcctccaaa
gggaagctgaagattaacatgaaaaagtactgcaagaaggactatgctgtccagatccac
attttgaaggcagacaaggcaggggactggtggaagttcacggtgaacatcatctctgtg
tacaagcaaggcaccagccgcatccgccgtggtgaccagagcctgtggatccgctcgcgt
gacatcgcctgcaagtgccccaaaatcaagcccctcaagaagtacctactgctgggcaat
gccgaggactcacccgaccagagtggcatcgtggcggacaagagtagcctggtgatccag
tggcgggacacgtgggcgcggcggctgcgcaagttccagcagcgtgagaagaagggcaag
tgcaagaaggcctaa
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