Sciurus carolinensis (gray squirrel): 124980437
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Entry
124980437 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20-like
KO
K24741
WD repeat-containing protein 20
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124980437
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
124980437
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_WDR75_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
124980437
NCBI-ProteinID:
XP_047401943
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Position
3:complement(60335694..60337895)
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AA seq
597 aa
AA seq
DB search
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNHVPFNSQGSNPVRISFLNLNDQSG
NGDRLCFNVGRELYFYIYKGVHKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLV
DFSSGQVQLIDPIKKETSKLFNEEVEERLLVNTIWKQLWLRMAQNATXRTRKRLIDKARI
TCVKWVTRSESLLLVAHSSGNMYLYNVEHTCGXTAPHYQLLKQGESFAVHTCKSKSTRNP
LLKWTVGEGALSEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSP
DGKYIVTGGEDDLVTVWSFVDCQVIARGHGHKSWVSVVASDPYTTSVEESDPMEFSGSDE
DFQDHLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQ
PLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSIMDG
AIASGVSKFAPLSLQDRKERHHEKDHKRNYSMGHISSKSSDKLNLVTKTKTDPAKTLGTP
LCPRMEDVPLLELLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVSFNP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagggaggagggaaggagatgaacgagattaagacacaattcaccacccgg
gaaggtctgtacaagctgctgccacactcagagtacagccggcccaaccacgtgcccttc
aactcgcagggatccaaccctgtccgcatctccttcctcaacctcaacgaccagtctggc
aacggcgaccgcctctgcttcaatgtgggtcgggagctctacttctatatctacaagggg
gtccacaaggctgctgacttgagtaaaccaatagataaaaggatatacaaaggaacacag
cctacttgtcatgactttaaccacctaacagccacagcggaaagtgtctctctcctagtg
gacttttcctcaggccaagtccagcttatagacccaattaaaaaagaaactagcaaacta
tttaatgaggaagtagaggagaggctgttggtaaacacgatctggaagcagctctggctg
aggatggcacagaatgccacttagagaacaagaaagagactaatagacaaggcacgcata
acctgtgtcaaatgggtgacccgctcggaaagccttctcctagtagcccattcgagtggg
aacatgtacttgtataatgtggagcacacttgtggcnacacagccccccactaccagctt
ctgaagcagggagagagctttgctgtgcacacttgcaagagcaaatccacgaggaaccct
ctccttaagtggacggtgggcgagggggccctcagcgagtttgctttctccccagatggc
aagttcttagcgtgtgtgagccaggacgggtttctgcgggtgttcaatttcgattcagtg
gagctgcatggtacgatgaaaagctactttgggggcttactgtgtgtgtgctggagccca
gatggcaagtacattgtgacaggtggagaggacgacttggtgacagtctggtcctttgta
gactgccaagtaatagctagaggccatgggcacaaatcctgggtcagtgtggtggcatct
gatccctatactactagcgtagaagaaagcgaccctatggagttcagtggcagtgatgag
gacttccaggatcatcttcattttggcagagatcgagcaaacagtacacagtcccggctg
tccaagaggaactctactgacagccgcccggtaagtgttacgtaccgctttggttcagtg
ggccaggacacgcagctgtgtttgtgggaccttacggaagacatccttttccctcaccaa
cccctctcaagagcaaggacacacacaaatgtcatgaatgccacaagtcctcctgctgga
agtaatgggaacagtgtcacaacacctgggaactctgtgccccctccgctgcctcggtcc
aacagccttcctcactcggcggtctccaatgcaggcagcaaaagcagcatcatggacggg
gccattgcctctggggtcagcaaatttgcacctctctcactgcaagaccggaaggagaga
caccatgagaaagaccacaagcgaaactatagcatgggacacatttctagcaagagcagt
gacaaactgaatctagttactaaaaccaaaacggacccagctaaaactttgggaacgccc
ctgtgtcctcggatggaagacgttcccttgttagagctgctgatctgtaaaaagatagca
catgaaagactgactgtattaatttttcttgaagactgtatagtcactgcttgtcaggag
ggatttatttgcacatggggaaggcctggtaaagtggtaagttttaatccttaa
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