Sciurus carolinensis (gray squirrel): 124980501
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Entry
124980501 CDS
T08117
Name
(RefSeq) cadherin-17-like
KO
K06811
cadherin 17, LI cadherin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
124980501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124980501
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124980501
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
He_PIG
SKG6
Motif
Other DBs
NCBI-GeneID:
124980501
NCBI-ProteinID:
XP_047402112
LinkDB
All DBs
Position
1:43916696..43978987
Genome browser
AA seq
831 aa
AA seq
DB search
MTPALLCSLCLLTLYLTTGYGQDGKFSGPLKPMTFSIFEGQEPSQVIYQFKANPPAVSFE
LTGETDDIFKIQPDGLLYYVRALDREARATHNLQIAALDAHGATVEGPVPVTIEVKDIND
NRPTFLQSKYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLFYQIVIQLPNVNGVMYFQ
INNKTGAISLTRPGSQELDPVKNPSYNLVVSVKDMGGQSENSFSDTASVDITVKENIWKA
PEPVEVLENSTDPHPLKITQVRWNEPGAHYSLADRDKLPIFPFSIDQEGDIYVTQPLDRE
KKDSYIFYATAKDEYGKPLAFPLEIHVKVKDINDNPPTCPSPVTVFEVQENEGLGSSIGT
FTALDMDEENTIHSVLKYKIVSQTPQIPKDGLFLVEEYSGKFQLARQSLKKQDSPHYNLT
VEVSDQDFKTLCFVQINVIDINDQIPIFEKSDYGNLTLPEDTAVGTIILTIQATDDDEPF
TGSSKILYRIIQGDDEGRLGVDTDPHTNRGYVTIKKPLDFETAAFSSIVFKAENPEPLVS
GVTYNASSFASFKLIVTDVNEAPVFSQDVFQGKVKEDVAVGTKVGNVTAWDPEGLAISYS
LTGDTRGWLKINSSTGEIFSVAPLDREAESVYRVQVVATEVGGSSLRSTSNFHLTLTDVN
DNPPRLAKDYSGLFLCHPLSAPGSVIFEATDDDQQSFRGPQFTFALGSESLQNDWEVSKI
NGTHARLSTKHTDFEERLYKISIRINDGGRPPLEGTVSLPVTFCTCVDGSCFRPVGSQEG
RPTVGMAVGILLTTLLVIGIILTVVFIRIKNDKGNDNVENARSSEVKPLRS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgactccagccctcctttgctccctgtgtcttctcaccctttatttgacaactggatat
ggccaagatgggaagtttagtggacccctgaagcccatgacattttctatttttgaaggt
caagaaccgagtcaagtcatataccagtttaaggccaatcctcctgctgtgagttttgaa
ctaactggagaaacagacgacatatttaagatacaaccagatggacttctgtattatgtc
agagcactggacagggaagcaagagctactcacaatctccagatcgcagccctggatgct
cacggagccacagtggagggcccagtccccgtcaccatagaagtgaaggacatcaatgac
aatcgacccacgtttctccagtcaaagtatgaaggctcagtgaggcagaactctcgtcca
ggaaagcccttcatgtatgtcaatgctacagacttggatgacccagccactcccaatggc
cagcttttttatcaaattgtcattcagcttcccaacgtcaatggtgtcatgtactttcag
atcaacaacaaaacaggggcaatatcacttacccgaccagggtctcaggaactggatcct
gttaagaatccttcctacaatctggtggtctctgtgaaggacatgggaggccagagtgag
aattcattcagtgatactgcatctgtggacattacggtgaaggagaatatttggaaagca
ccagaacctgtggaggttctagaaaattcaactgatcctcatcccctcaaaatcactcag
gtgcggtggaatgagccaggtgcacactattccttagctgacagagataagctgccaata
ttcccattctccatcgaccaggaaggagacatttatgtgactcagcccttggacagagaa
aaaaaggattcatacattttttacgcaactgcaaaggatgagtacggaaaaccacttgca
ttcccgctggaaattcatgtgaaagttaaagatattaatgacaatccaccgacatgtcca
tctccagtgacagtatttgaggttcaggagaatgaaggactgggtagcagcattgggacc
ttcactgccctggacatggatgaagaaaacacgatccatagtgtcttaaagtacaaaatt
gtgtcacaaactcctcaaattcccaaagatggactcttcctggttgaggaatattcagga
aagttccagttagctaggcaatctttgaagaagcaagattctcctcactacaacctcaca
gtagaggtgtcggaccaagatttcaagaccctctgttttgtgcaaatcaatgtcattgat
atcaatgatcagattcccatctttgaaaagtcagattatggaaacctgactctccctgaa
gacacagcggttgggaccatcatcttaaccattcaagccactgatgatgacgagccattt
acgggaagttctaaaatcctgtatcggattattcaaggagacgatgaaggaagactggga
gttgacacagatccccacaccaataggggatatgtcacaatcaaaaagcctcttgacttt
gaaacagcagctttttccagcatcgtgttcaaagcagaaaatcctgagcctcttgtgtct
ggagtaacatacaacgcaagttcttttgcctcgttcaaacttattgtaacagatgtgaat
gaagcgcccgtattttcccaggatgtattccaagggaaagtcaaagaggatgttgctgtt
ggcactaaagtgggcaatgtgactgcctgggatcctgaaggtttggccatcagttactca
ctgacaggcgacacaagaggttggcttaaaattaactccagcactggtgagatctttagc
gtggctccgctggacagggaagcagaaagtgtgtatcgtgtacaagtcgtggccactgaa
gtaggcgggtcatctttgagatccacgtcgaatttccacctgaccctcacagatgtgaat
gacaaccccccaaggctagccaaagactactcgggcctgtttctctgccatcccctctct
gcacctgggagtgtcatttttgaggccactgatgatgaccagcagtcatttcggggtccc
caatttacattcgcccttggcagtgaaagcttacagaacgactgggaggtttccaagatc
aatggtactcatgccagactctccaccaagcacacagactttgaggagagactttataaa
atctccatccgcatcaatgatgggggtcggccacccttggaagggactgtctctttacca
gttactttctgcacatgtgtggatgggagttgtttccggccagtaggtagccaggaaggg
aggcccactgtgggtatggcagttggtatactcctgacaacccttctggtcattggtata
attttaacagttgtgtttatccgcataaagaatgataaaggcaatgataatgttgaaaat
gctcggtcatctgaagtcaagcctctgagaagctga
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