Sciurus carolinensis (gray squirrel): 124980507
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Entry
124980507 CDS
T08117
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124980507
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124980507
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124980507
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124980507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
Sec7-like_HUS
Cnd1
HEAT_2
RTP1_C1
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
124980507
NCBI-ProteinID:
XP_047402075
EnsemblRapid:
ENSSCRG00010003246
LinkDB
All DBs
Position
3:77454813..77719232
Genome browser
AA seq
1558 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHGHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLESRPLREDMEYVGLDAGRIRTRR
QSSGSATNVASTPSDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGG
SSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRD
TSPARGFPPLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRR
YEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEG
LLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDW
LFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVK
VAILKYIESLARQMDPTDFINSSETRLAVSRIITWTTEPKSSDVRKSPLQRSRVGEDFPA
RSASTCSGPGEGNLEENCKQAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHL
KNSSNTSVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYS
SLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGSSEGEGGRTA
LDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDH
SDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDH
SIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHP
EQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLADIIPGLLQGYDNTESSV
RKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggagtcctgcctggcccaggtgttgcaaaaggatgtggggaaacga
ctgcaggttggccaagaacttatagactatttctcagataaacagaagtctgctgacctt
gagcatgaccagaccatgttagataagcttgtggatggacttgctacctcttgggtgaac
tctagcaattacaaggtggttcttctgggcatggacatcctgtcggctctggtgacccgg
ctgcaggatcggttcaaggcgcaaatcggcacagtgctgccaagtctaatcgacagactg
ggagatgctaaagactccgtgagggagcaagaccaaactctgctgctaaagatcatggat
caagctgctaatccccagtatgtatgggacagaatgcttggaggcttcaaacacaagaat
ttccgtacaagagaaggcatctgtctttgccttattgcaacactcaatgcctctggagca
catactctaacactaagcaagatcgtgccacatatatgtaacttacttggagatcccaac
agccaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccggctgaatgtcattttt
acaaaatttgatgaagttcaaaaatctggaaatatgatacagtctgcaaatgataaaaat
tttgatgatgaagattctgtggatggtaatagaccttcctctgctagttctacatcatcc
aaggctcctccaagctcacggagaaacgttggaatggggaccacccgccggcttgggtca
tccactcttggatccaagtcttcagctgcaaaagaaggtgctggtgctgttgatgaagag
gattttattaaagcatttgatgatgtacctgtagtgcagatttattccagccgagacctt
gaggaatccataaacaaaattagggaaatattatctgatgacaaacatgattgggagcag
agagtaaatgctctaaaaaagattagatctttacttttggctggtgctgctgagtatgat
aacttctttcaacatctgcgtcttttggacggagcctttaaactctctgctaaggatctg
cggtctcaggtagtgcgggaggcttgtatcacattggggcatctgtcatcggttctagga
aataaatttgaccatggagctgaagccattatgccaactatctttaatttaattccaaac
agtgccaaaattatggccacttctggtgttgtagctgttaggttaatcattcggcacaca
cacatccctagactaatacctgttataacaagcaactgtacctctaagtctgttgcagtt
agaaggcgctgttttgaatttttagatttgcttttacaagaatggcagacacattcactg
gaaagacacatatcagtattagctgaaacaataaagaagggaatccatgatgctgattct
gaagcaagaatagaagccaggaaatgttactggggcttccacggtcacttcagcagagaa
gcagagcacttatatcacaccttggagtcctcctaccagaaagccctgcagtcccatttg
aagaattcagacagcatagtgtctctgcctcagtccgatcgctcgtcttctagctctcag
gagagtctcaatcggccactctctgccaaaagaagccctactggcagtaccacatctaga
gcttctacagttagcaccaaatctgtatcaacaaccggatccctccagcgatctcgaagt
gatattgatgtgaacgcagctgccagtgccaaatctaaagtctcctcatcttcaggcacg
acacccttcagttctgcagcggctttgcctccagggtcctatgcatctttagagtccaga
cccctgagggaagacatggagtacgtaggcctggatgcaggtcgcatccgcacaagacgg
caaagctctgggagtgccacaaatgttgcttctacaccttctgacagtcggggccgcagt
cgtgctaaagtggtttcacagtctcagcgatccagatctgctaatcctgctggtgctggc
agccggtcaagttccccagggaaattgttgggaagtggctatggtggacttactgggggt
tcctcgagaggcccacctgtgacaccatcttcagaaaaacgaagcaagattcccaggagt
caggggtgtagccgagaaacaagtccaaaccgaataggattagcacggagcagccgtatc
cctcgacccagcatgagtcaggggtgcagccgcgataccagccgtgagagcagccgagat
acgagccctgctcggggcttccctccactcgaccggtttgggctgggccagccaggaaga
atacccggttctgtaaatgctatgagagttttgagcacgagtacagatctggaagctgca
gttgctgatgctttgctgttaggagacgccaggagcaagaagaagcccgtgaggaggaga
tacgagccatatgggatgtattctgacgatgatgccaatagtgatgcctcaagtgtttgc
tctgagcgctcatatggctccaggaatggtggaatcccccattatttgcggcagacggag
gatgtagcagaagttctcaaccactgtgcgagttcaaactggtcagaaaggaaagaaggg
ctgctgggcctgcagaacttgctgaagagccaaagaacactgagtcgagtagaattgaag
agattgtgtgagatcttcacccgaatgtttgctgaccctcatagcaagagagttttcagt
atgttcttggagactcttgtggattttataataattcataaggatgacttgcaagactgg
ctttttgttcttctcacacaattacttaagaaaatgggagcagatttgcttggatctgtg
caagcaaaagttcagaaggctctagatgtcacaagggactcctttccatttgatcaacag
tttaacattttgatgagatttattgtggatcaaactcagactccaaacctcaaggtcaaa
gttgcaatcctgaaatacattgagtctctggccagacagatggatccaacagattttata
aactctagcgagacaagacttgctgtttctagaatcattacctggacaacagaaccaaag
agttcagacgtgagaaagtccccgcttcagcgtagtcgagtaggggaggatttccctgct
aggtcagcatccacctgctctgggcctggagaaggaaacttggaagaaaattgtaaacag
gcagcacagattgtgctcatctctctgtttgaattgaacactccggaatttaccatgtta
cttggtgccttgccaaaaacattccaggatggtgccaccaaactcctgcataaccacctc
aagaactccagtaacaccagtgtgggatctccaagcaatacaattggccggacgccctcc
cgacaccccagcagcaggaccagccccctgacctcacctaccaactgttcccatgggggt
ctatctccaagcatgctggactatgacacagagaacctgaactctgaagaaatctatagt
tctctgcggggagttacagaagccattgaaaagtttagtttccgaagccaagaagatctg
aatgagccaattaagcgagatggcaaaaaggactgtgatatcgtatcccgtgacggggga
gctgcctcaccagccactgagggccggggaagcagtgaaggggagggaggcaggacagct
ctggacaacaagacctccctcctcaacacccagcctccacgcgccttcccagggccgcga
gcacgggagtacaacccatatccctactcagacaccatcaacacctatgacaagactgcc
ctgaaggaggccgtgtttgatgacgacatggagcagcttcgagatgtgcccatcgaccat
tctgacctggtggctgacttactgaaagagctgtccaaccacaacgagcgggtagaggag
cggaaaggcgccctgctggagctgctcaagatcacaagggaagatagcctgggcgtctgg
gaggagcacttcaagactatcctgctgctgctgctggagacccttggagacaaagatcat
tcaattcgagcactggcattgagagttttgcgggaaattctgagaaaccagcctgcaaga
ttcaaaaactacgctgagctgacgatcatgaagactctggaagcccacaaagactcccac
aaggaggtggtgagagctgccgaggaggctgcatccacactggccagttctatccaccca
gagcagtgcatcaaagtgctctgccccatcatccagacagccgactaccccatcaacctg
gccgccatcaagatgcagaccaaagtggtggagagaattgccaaggagtccttgctgcaa
ctcctggcggacatcatcccgggcttactgcagggttatgacaacacggaaagcagcgtg
cgtaaggccagcgtgttttgcttagtggcaatttattccgtaatcggagaagacctgaaa
cctcaccttgcacagctcacggggagcaagatgaagctactaaacttatacataaagagg
gcacagaccaccaatagcaacagcagctcctcctccgacgtctccacgcacagctag
DBGET
integrated database retrieval system
