Sciurus carolinensis (gray squirrel): 124980543
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Entry
124980543 CDS
T08117
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04152
AMPK signaling pathway
ncar04910
Insulin signaling pathway
ncar04931
Insulin resistance
ncar04932
Non-alcoholic fatty liver disease
ncar04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
124980543
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
124980543
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
124980543
04932 Non-alcoholic fatty liver disease
124980543
04931 Insulin resistance
124980543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124980543
04131 Membrane trafficking [BR:
ncar04131
]
124980543
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
124980543
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124980543
Autophagy
Mitophagy
Other mitophagy associated proteins
124980543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
124980543
NCBI-ProteinID:
XP_047402172
LinkDB
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Position
3:complement(40945573..40967827)
Genome browser
AA seq
1145 aa
AA seq
DB search
MEGPSFGETALEQTLAELCELDTTLLTDMEDMLQLINNQDSDFPGLFDPPYAGGGAGDTE
PASPSASSPGSLSPSPASLSSPLEAFLGDPKAAPSPLSPPQSAPTPLKMYPSVSPFSPGP
GIKEEPVPLTILQPPTPQPLSGTLLPQSFVSPAPPQFNSAPVLGYSNPPGSFSAGIPPGS
TQQPLPGLPLASPPGVPPVSLHSQVQSATPQQLLTATAAPGTTTVTSQIQQVPVLLQPHF
IKADSLLLTTMKTDVGATVKAAGISSLAPGTAVQTGPLQTLMSGGTILATVPLVVDTDKL
PINRLAAGSKAGGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAVL
RKAIDYIRFLQHSNQKLKQENLSLRTAAHKSTESLKDLVSTCGSKGNTDVPMEGVKPELD
TLTPPPSDAGSPSQSSPLSLGSRGCGSGGSSSDSEPDSPVFEDSQVKPEQLPSPHSRGML
DRSRLALCTLVFLCLSCNPLASLLGGWKLPGPSDATGIHHSSGRNMLGTEGRDGSDWAQW
LLPPLVWLVNGLLVLASLAFVFVYGEPVTRPHSGPAVHFWRHRKQADLDLARGDFAQAAQ
QLWLALQALGRPLPTSHLDLACSLLWNLIRHLLQRLWVGRWLAGQAGGLRRDCTLRVDAC
ASARDASLVYHKLHQLHTMGKYTGGHLAATNLALSALNLAECAGDAVSMATLAEIYVAAA
LRVKTSLPRALHFLTRFFLSSARQACLAQSGSVPLAMQWLCHPVGHRFFVDGDWAVRSAP
WESLYSLAGNPVDPLAQVTQLFREHLLERALNCVAQPSPSPSSGSADGDREFSDALGYLQ
LLSSCSDVAGAPACSFSINSSVAATTGTDPVAKWWGSLTAVVIHWLRRDEEAAERLYPLV
EHLPRALQESEKPLPKAALHSFKAARALLGRRKSESGPASLAICEKASGYLRDSLATTPT
GSSIDKAVQLLLCDLLLVARTSLWRQQQPPASAQVAQGASGGPQASALELRGFQRDLSGL
RRLAQSFRPAMRRVFLHEATARLMAGASPTRTHQLLDRSLRRRAGPGGKGAAAELEPRPT
RREHAEALLLASCYLPPGFLSAPGQRVGMLTEAARTLEKLGDRRLLHDCQQMLMRLGGGT
TVTSS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggaggggccgtccttcggcgagacggctctggagcaaacgctggctgagctgtgcgag
ctggacacgacactgctgaccgacatggaagacatgcttcagctcatcaacaaccaagac
agtgacttccctggcctgtttgatccaccttatgctggaggcggggcaggggacacagag
cctgccagccccagtgccagctccccaggaagcttgtctccatctcctgcctcgctgagc
tcacctctggaagccttcctgggggaccccaaggcagcaccctcacccctgtcccctccc
cagtcggcacccaccccattgaagatgtacccatccgtgtcccccttctcccctggacct
ggtatcaaagaagagccagtgccactaaccatcctgcagccccccaccccacaacccctg
tcggggaccctcctgccccagagttttgtgtccccagcccctccacagttcaactctgcc
cctgtgttgggttactccaatcctcctggaagcttttcagcagggatccctcctgggagc
acccagcagccgctgcctggcctgccactggcttccccgccaggggtcccacctgtctcc
ttgcatagccaggtccagagtgcgactccccagcagctgctgacagccacagcggcccct
ggaacaaccaccgtaacttcacagatccagcaggtcccggtcctgctgcagccccacttc
atcaaggcagactcactgctcctgaccaccatgaagacagacgtgggggccactgtgaag
gctgcgggtattagctccctggcccctggcacagctgtacagacagggccactgcagacc
ctgatgagtggcggaaccatcctggccacagtcccactggttgtggacactgacaagctg
cccattaaccggctggcagctggcagcaaggccgggggctcagcccagagccgtggtgag
aagcgcacagcccacaatgccatcgagaagcgctaccgctcttccatcaacgacaagata
gtggagctcaaggatttggtggtgggcaccgaggcaaagctgaataaatctgctgtcttg
cgcaaggccattgactacatccgcttcttacaacacagcaaccagaaactcaagcaggag
aacctaagtctgcgaactgctgcccacaaaagcacagaatcactaaaggatctggtgtcc
acttgcggcagtaaaggaaacacagacgtgcccatggagggtgtgaagcctgagttggac
acactgaccccgccaccctcagatgctggctcaccctcccagagcagccccttgtccctt
gggagcaggggttgtggcagtggtggcagcagcagtgactcggagcctgacagcccagtc
tttgaggacagccaggtgaagccagagcagttaccttcgccccacagccggggcatgctg
gatcgctcccgcctggccctgtgcacacttgtcttcctttgtctgtcctgtaaccccttg
gcctccctgctgggtggctggaagcttcctggcccctcagatgccacgggtatccaccac
agttctgggcgcaacatgctgggcacagagggcagagatggctccgactgggcccagtgg
ctgctgccccctctggtctggctggtcaatgggctactggtgctggcctccttggcattt
gtctttgtctatggggaaccagtgacacggccccactcaggccctgctgtgcacttctgg
agacatcgcaagcaggctgatctggacctggcccggggggactttgcccaggctgctcag
cagctgtggctggccctgcaggcactgggcaggcccctacccacctcccacctggacctg
gcctgcagtctgctctggaacctcattcgccacctgctacagcgactctgggtgggccgc
tggctggcgggccaggctgggggcctgagaagggactgtacattgagggtggatgcatgc
gccagtgcccgagatgcgtccctcgtctaccataagctgcaccagctgcacaccatgggg
aagtacacgggtgggcaccttgctgccaccaacctcgcactgagtgccctgaacctggca
gagtgtgcgggggatgctgtgtccatggcaacgctggcggagatctacgtggcagctgcc
ctgagggtcaagaccagtctgccaagggccttgcactttctgacacgcttcttcctgagt
agcgcccgccaggcctgcctggcacagagtggctcagtgcctcttgccatgcagtggctc
tgccaccctgtgggtcaccgtttcttcgtggatggggactgggccgtgcgcagtgccccg
tgggagagcctgtacagcttggccgggaacccagtggaccctctggcccaggtgacacag
ctgttccgtgaacatctcctggagcgagcactgaactgtgtggcccagcccagccccagc
cccagctctggatcagctgatggggacagggaattctcagatgccctgggatacttgcag
ctgctgagcagttgttctgatgttgctggagctcctgcctgcagcttctccatcaactcc
agcgtggctgccaccaccggtacagaccctgtggccaagtggtggggctcattgacggcg
gtggtgattcactggctgcggcgggatgaagaggctgctgagcggctctaccctttggta
gagcacctgccccgtgctctgcaggagtccgaaaaacctctgcccaaggcggcactgcac
tccttcaaggctgcccgggctttgttgggtcgtagaaagtcagagtctggcccagccagc
ctggccatctgcgagaaagccagtgggtacctgagggacagcctggccaccactccaact
ggcagctccattgacaaggccgtgcagctgctcctgtgtgacctgctccttgtggcacgc
actagcctgtggaggcagcagcagcccccagcctcagcacaggtggctcagggtgccagc
ggtgggccccaggcctctgccctcgagctacgcggcttccaacgggacctgagtggcctg
aggcgtctggcacagagcttccgtcctgccatgaggagggtgttcttacatgaggccaca
gcccggctgatggcaggagccagccctacacggacacaccaactcctggaccgcagtctg
aggaggcgagcaggtcctggtggcaaaggcgccgcggcggagctggagccgcgacctacg
aggcgggagcatgcagaagctctgctactggcctcctgctacctgccgcccggcttcttg
tcggcaccggggcagcgtgtgggcatgctgactgaggcggctcgtactcttgagaaattg
ggcgatcgccggcttctgcacgactgccagcagatgcttatgcgcctgggcggcgggact
acagttacctccagctag
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