Sciurus carolinensis (gray squirrel): 124980591
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Entry
124980591 CDS
T08117
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04260
Cardiac muscle contraction
ncar04261
Adrenergic signaling in cardiomyocytes
ncar04921
Oxytocin signaling pathway
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124980591
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
124980591
09153 Circulatory system
04260 Cardiac muscle contraction
124980591
04261 Adrenergic signaling in cardiomyocytes
124980591
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124980591
05412 Arrhythmogenic right ventricular cardiomyopathy
124980591
05414 Dilated cardiomyopathy
124980591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124980591
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124980591
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Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
124980591
NCBI-ProteinID:
XP_047402276
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Position
3:23043847..23063712
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AA seq
643 aa
AA seq
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MVQKSSMSRGPYPPSQEIPMEVFDPSPQGKYSKRKGRFKRSDGSTSSDTTSNSFVRQGSA
ESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPGDEVP
VQGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLLQEQKLRQNR
LSSSKSGDNSSSSLGDVVTGTRRPTPPASGNEMTNFAFELDPLELEEEEAELGEQSSSAK
TSVSSVTTPPPHGKRIPFFKKTEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDF
LKHRFDGRISITRVTADISLAKRSVLNNPSKHIIIERSNTRSSLAEVQSEIERIFELART
LQLVALDADTINHPAQLSKTSLAPIIVYIKITSPKVLQRLIKSRGKSQSKHLNVQIAASE
KLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHPPSSTPPNPLLNRTMATAALAA
SPAPVSNLQGPYLASGDQPLERATGEHASVHEYPGELGQPPGLYPSSHPPGRAGTLRALS
RQDTFDADTPGSRNSAYTELGDSCVDMETDPSEGPGPGDPAGGGTPPARQGSWEDEEEEY
EEELTDNRNRGRNKARYCAEGGGPVLGRNKNELEGWGRGVYIR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggtccagaagagcagcatgtcccggggcccttacccaccctcccaggagattcccatg
gaggtcttcgatcccagcccacagggcaaatacagcaagaggaaaggacggttcaaacgg
tctgatgggagtacttcctcagatacaacatccaacagctttgtccgccagggctcagca
gagtcctacaccagccgcccatcagactctgacgtgtctctggaagaggaccgggaagct
ttgaggaaggaggcagagcgccaggcattagctcagcttgagaaagccaagaccaagcca
gtggcatttgctgtgagaacaaatgtcggctacaatccatctccaggggatgaggtacct
gtgcagggagtggccatcacctttgagcctaaggacttcttacacatcaaggagaaatac
aataatgactggtggatcgggcggctggtgaaggaaggctgcgaggttggattcatcccc
agccctgtcaaactggacagcctgcgcctgcttcaggaacagaagcttcgccagaaccgg
ctcagctccagcaaatcaggtgacaactccagttccagtctgggagacgtggtgactggc
acccgccgccccacaccccctgccagtggtaatgaaatgactaactttgcctttgaacta
gaccccctagagttagaggaggaggaggcagagcttggtgagcagagcagctctgccaag
actagtgttagcagtgtcaccaccccgccaccccatggcaaacgcatccccttctttaag
aagacagagcatgtgcccccttatgacgtggtgccttccatgaggcccatcatcctggtg
ggaccgtcgctcaagggctatgaggttacagacatgatgcagaaagctttatttgacttc
ttgaagcatcgatttgatggcaggatctctatcacacgggtgacggctgacatttcccta
gctaagcgctccgttctcaacaaccccagcaagcacatcatcattgagcgttccaacaca
cgctccagcctggctgaggtgcagagtgagatcgagcggatcttcgagctggccaggact
cttcagttggtggctctggatgctgacactatcaaccacccggcccagctctccaagacc
tcgctggcccccatcattgtttacatcaagatcacctctcccaaggtacttcagaggctc
atcaaatcccgagggaagtctcagtccaaacacctcaatgtccaaatagcagcctcggag
aagctggcacagtgtccccctgaaatgtttgacatcatcctggacgagaaccaattggag
gatgcctgcgaacacctggccgagtatttggaagcgtattggaaggccacacacccgccc
agcagcacaccacccaatccgctgctgaaccgcaccatggctaccgcagccctggctgcc
agccctgcccccgtctccaacctccagggaccctaccttgcttccggggaccagccactg
gaacgggccaccggggagcacgccagcgtgcacgagtacccgggggagctgggccagccc
ccgggcctttaccccagcagccacccaccaggccgggcaggcaccctgcgggcactgtcc
cgccaagacacgtttgatgccgacacccccggcagccgaaactctgcctacacggagctg
ggagactcgtgtgtggacatggagactgacccctcagaggggccagggcctggagaccct
gcagggggcggcaccccaccagcccggcagggttcctgggaggatgaggaagaagagtat
gaagaggagctcactgacaacaggaaccggggccggaataaggcccgctactgtgcagag
ggcgggggtccggttctggggcgcaacaagaatgagctggagggctgggggcgaggcgtc
tacatccgctga
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