Sciurus carolinensis (gray squirrel): 124980618
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Entry
124980618 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124980618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124980618
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124980618
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124980618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
124980618
NCBI-ProteinID:
XP_047402347
LinkDB
All DBs
Position
3:complement(33032000..33091950)
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AA seq
779 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNR
KAHVRIELKESPAWPDYDVWILLTVVGTIFVVILASVLRIRCRPRHSRPDPLQQRTAWAI
SQLATRRYRASCRKAQAEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRSCVD
PWLHQHQTCPLCMFNIVEGDSFSQPLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLG
PSRNSGTRPPRPRPFLPSQEPRHQRLPRAAHLRAAGEQQRLAVTQHPYAQGWGLNQLRCT
SQHPTPCPAPLRRGRPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVNCTD
VSLQGIHGSSSTFRSSLSSDFDPLVYCSPQGDPKGEEIQPSVTSRPHSLDSVVPTGETQV
SSHVHYHRHRHHHYKKRFQWHGRKSGPETGVPQSRPAVSQTQPQQEPPFTDQQTTRSNPA
ALLGQPSNPQRPRALTEPAPGLPEAASSSPSFPSLLNLQKSSLTLRHPQRKRRGGPSDST
PVSRPQDLTIHRACQMFPHYSPSLAYLWPPEAHPLVFRPPDLDRRLRPEAPGPCYSSSQP
VWLCLTPRQSLGPHPPGEGPSEWSPDTLEGRPCPYPHCQVLPAQPGSEEELEELCEQTV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtactggcagcagcggtggagtctgaaaga
tcagcagagcagaaagctattatcagagtgatccccttgaaaatggaccctacaggaaaa
ctgaatctcactttggaaggtgtgtttgctggtgttgctgaaataactccagcagaagga
aaattaatgcagtcccaccccctgtatctgtgtaatgccagtgatgacgacaatctggag
cctggattcatcagtatcgtcaagctggagagtcctcgacgagcccctcgcccctgcctg
tcactggccagcaaggcccggatggctggagagcgaggagccagtgcagttctctttgac
atcacagaggatcgagctgctgctgaacagctgcagcagcctctagggctgacttggccg
gtggtgctcatctggggtaatgatgctgagaagttgatggagtttgtgtacaagaaccgg
aaggcccatgtgaggattgagctgaaggagtcccctgcctggccagattatgatgtgtgg
atcctcctgacagtggtgggcaccatctttgtggtcatcctggcctcggtgctgcgcatc
cggtgccgcccccgacatagcaggccggacccgcttcaacagcgaacagcctgggccatc
agccagctggccaccagaaggtaccgggccagctgcaggaaggctcaggctgagtggcca
gactcaggtagcagctgcagctcagcccctgtgtgtgccatctgcctggaggagttctct
gagggccaggagcttcgggtcatttcctgtctccatgagttccatcgctcctgtgtggac
ccctggctacatcagcatcagacttgtcccctctgcatgttcaacatcgtagagggagat
tcattttcccagcccctgggaccctctcgatcttaccaggaaccaggcaggagactacac
ctcattcgccagcatcctggccatgcccactatcacctccctgctgcttacctgttgggc
ccttctcggaattcagggactcggcccccacgacctagacccttcttaccatcccaggag
cctcggcaccaacgcctccctagagctgcgcatctccgggctgcaggtgaacagcagcgc
ctggcagtgactcagcacccctatgcacagggctgggggctgaaccaactccgatgcaca
tctcagcaccccacaccttgcccagcgcctctgcgccggggcaggcctcatgacagcagc
gggtctggagaaagctactgcacagaacgcagtggctacctggcagatgggccagccagt
gattccagttcggggccctgtcatggctcttccagtgactcagtggtcaactgcacagac
gtcagcctgcaaggcatccatggcagcagctctactttccgcagctccctgagcagtgac
tttgaccccttggtgtactgcagccctcaaggggacccaaagggggaggagatacaaccc
agtgtgacctctcggccccattccttggactcagtagtgcccactggggaaacccaggtt
tctagccatgtccactaccaccgccaccggcaccaccactacaaaaaacgattccagtgg
catggcaggaagtctggcccagaaactggagttccccagtccaggcctgctgtttctcag
acacagccccagcaagagccacctttcactgatcagcaaaccaccagatccaatccagca
gcccttttggggcagccctcaaacccacaacggcccagggccctcacagagccagctcct
ggcctgcctgaagctgccagttccagccccagtttccctagccttttaaacttgcagaaa
tccagtctcactctgcgacatccacagagaaaacggcggggtggtccctcagattccact
ccagtctctcggccccaggatttgactatacaccgggcctgccagatgttccctcattac
agccccagcctggcatatctttggcccccagaggcccacccactggtcttcagacctcca
gacctggataggaggctgcgaccagaagccccaggcccctgttactcaagttcacagcca
gtgtggttgtgtttgactccacgccagtccttgggacctcacccacctggggaggggcct
tctgaatggagtcctgacaccctagagggcaggccgtgcccttacccacactgccaggtg
ttgccagcccagccagggtcagaggaggagcttgaggagctgtgtgaacagaccgtgtga
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