Sciurus carolinensis (gray squirrel): 124980662
Help
Entry
124980662 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase iota-like
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124980662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124980662
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124980662
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
124980662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_HHH
IMS_C
Cdd1
HHH_5
DNA_pol_lambd_f
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
124980662
NCBI-ProteinID:
XP_047402419
LinkDB
All DBs
Position
3:132180333..132182397
Genome browser
AA seq
648 aa
AA seq
DB search
MISNPELKDKPLGVQQKYLVVTCNYEXRKFRIRKLMNVRDAKEKCPQLVLVNGEDLTCYR
EMSYMVTEIVEKKLQQLQSDELSAVTVXGHVNNNQSINLHDIMHIRLLVGSQIAAEMREA
MYNQLGFTGCTGVACNKLLAKLVSGVFKTNQQTILLPESCQDLIHSLNHVKEMPGIGYKT
AKRLEALGISSVHDLQTFSSKILEKELGISVAQWIQKLSFGEDNSPVTSSGPPQSFSEED
SFKKCSSEVEAKKKIEELLASLLKRISQDGRKPHTIRLVICQYSSEKYYCHESGQCPIPS
HVIQKLGAGNYDVMTPMVDILIKLFRNIVNVKMPFHLTLLSVCFCNLKTLNTTEKGPMDY
YLASSLSTMSCSGKRSFKIKDSHMEDISKDKETNWDFLPNARIESIRTGESPIDTSDFSK
EKDKNEFPLCSLPEGVDQEVFKQLLVDIQEEILSGRFREKFQGKGNLSYPLHASKGVLSF
FSTKQLQDRSLNPRDNLSNNKQIHSVSPCEPGTSGLSSSSSSYLSSPEDYSYYIDNRLKD
EQMSQGPKESEGFYFSNTNPAVSVFHSFPNLHSDQLFSKNCATDSHKQKMATTSCQGLTE
NKEKDSADEIIFPSGIDPQVFYALPEEVQKELLAEWRRPGSDFHIVHK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgatctcaaaccccgaattaaaggacaaacctttaggtgtacagcagaaatatttggtg
gttacttgcaactatgaangcaggaaatttagaattaggaaacttatgaatgtcagagat
gcaaaagaaaaatgtccacaactggtattggttaatggagaagacttgacatgttacagg
gagatgtcttatatggttacagaaatagttgagaagaaactccagcagcttcaaagtgat
gaactttctgcagtgactgtgntcggtcatgtaaacaataatcagtccataaacctgcat
gacatcatgcacatcagactgctagttggatctcagattgcagcagagatgcgggaagcc
atgtataatcagttggggttcactggatgcactggagtggcttgtaataaactactggca
aaattagtttctggtgtttttaaaacaaatcaacaaacaatcttgttacctgaaagttgt
caagatctcattcatagtttgaaccatgttaaggaaatgcctggtattggctataaaact
gccaaacgtcttgaagcactgggaatcagtagtgtgcatgatctccaaaccttttcatct
aaaatattggaaaaggaattaggaatttcagttgctcagtggatccagaagctcagtttt
ggagaggataactctcctgtgacatcttcaggaccacctcagtcctttagtgaagaagat
tcatttaaaaaatgttcatcagaagtcgaagctaaaaaaaagattgaagaactacttgct
agccttttgaagagaatatcccaagatggaaggaaaccccatactataagattagtaatc
tgtcagtattcatcagagaagtattattgtcatgagagtggtcagtgccctattccatct
catgtaattcagaagttaggggcaggaaattatgatgtgatgaccccaatggttgatata
cttataaaactttttcgaaatatagtgaatgtgaaaatgccatttcaccttaccctttta
agtgtgtgcttctgcaacctgaaaacactaaataccactgagaaagggcccatggattat
tatttagcatcatcattatcaacaatgtcatgctctggcaagcgcagttttaaaataaaa
gacagtcatatggaagatatttccaaagacaaagaaacaaactgggattttctaccaaat
gcaagaattgaaagtataagaactggtgagtctccaatagatacttcagatttctctaaa
gaaaaagacaagaatgagtttccactctgttcacttcctgagggtgttgatcaagaagtt
ttcaagcagcttctagtagatattcaggaagaaatcctttctggaagatttagagaaaaa
tttcaagggaaaggaaatttaagttatccattacatgcctccaaaggagtgttatctttc
ttttctacaaaacaattgcaagatagatccttaaatcctagagataatttatccaataac
aagcagatacactctgtgtctccttgtgaaccaggaacatcaggcttaagtagcagtagt
tcctcttatctgtctagccccgaagattattcatattatatagataatcgattaaaagat
gaacaaatgagtcaaggacctaaagaatctgaaggtttctacttctccaatacaaaccct
gctgtttctgttttccattcatttcccaatttgcatagtgatcaacttttttccaaaaac
tgtgctacagatagtcataagcaaaaaatggcaacaacttcttgtcaaggactcacagaa
aataaagaaaaagattctgctgatgagattatttttccatctggcatcgatcctcaagtg
ttctatgcacttccagaagaggtacaaaaagaactgttggctgagtggaggagacctgga
tcagatttccacattgtacataagtaa
DBGET
integrated database retrieval system
