Sciurus carolinensis (gray squirrel): 124980707
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Entry
124980707 CDS
T08117
Name
(RefSeq) LLGL scribble cell polarity complex component 2 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04390
Hippo signaling pathway
ncar04530
Tight junction
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
124980707
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124980707
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124980707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124980707
Membrane trafficking [BR:
ncar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124980707
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_VPS8
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
DSE1_N
Lgl_C
Motif
Other DBs
NCBI-GeneID:
124980707
NCBI-ProteinID:
XP_047402529
LinkDB
All DBs
Position
3:complement(5586882..5623709)
Genome browser
AA seq
1024 aa
AA seq
DB search
MRRFLRPGHDPARERLKRDLFQFNKTVEHGFPHQPSALGYSPSLHILAIGTRSGAVKLYG
APGVEFMGLHRENNAVMQIHFLPGQCQLVTLLDDNSLHLWSLKVKGGVSELQEDESFTLR
GPPGAAPSATQITVALPHSSRELLYLGTESGNVFVVQLPGFRTLEDQTISSDAVLQRLPE
EARHRRVFEMVEALQEHPQDPNQVLIGYSRGLVVIWDLQGSRVLCHFLSSQQLENVSWQR
DGRLIVTCHSDGSHCQWPVSSETQQPEPLRTSMPYGPFPCKAITKIFWLTTRQGLPFTVF
QGGMPRASYGDRHCISVVHNGQQTAFDFTSRVIDFTVLAEADPAAAFDNPYALVVLAEEE
LVVIDLQTAGWPPVQPPYLASLHCSAITCSHHVSNIPLKLWERIIAAGGRQNAHFSTMEW
PIDGGTSLAPPPPQRDLLLTGHEDGTVRFWDASGVCLRLLYKLSTARVFLTDTDPSENLN
AQGEDEWPPLRKVGSFDPYSDDPRLGIQKIFLCKYSGYLAVAGTAGQVLVLELNDEAAEH
AVEQVEADLLQDQEGYRWKGHERLAARPGPVYFDPGFQPFVLVQCQPPAVVTSLALHSEW
RLVAFGTSHGFGLFDHQQRRQVFVKCTLHPSDQLALEGPLSRVKSLKKSLRQSFRRMRRS
RASSRKRRPAGPPGEMQAASTKPERTGLQNMELAPVQRKIEARSAEDSFTGFVRTLYFAD
TYLRDSSRHCPSLWAGTNGGTVYAFALRVPPAERRTDELVRAEQAKEIQLMHRAPVVGIL
VLDGHSIPLPEPLEVAHDLSKSPDMQGSHQLLVVSEEQFKVFTLPKVSAKLKLKLTALEG
SRVRRVGVAHFSSCRAEDYGEHHLAVLTNLGDIQVVSLPLLKPQVRYSCIRREDVSGIAS
CVFTKYGQGFYLISPSEFERFSLSTKWLVEPRCLVESAKMKNHSCPSNGNGPGLEKALGR
TRNSGSQSDGEEKKPGPVMEHALLNDERVLKEIQSTLEGDRGSYGNWRSHRTAVGYSLSS
GGAE
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggttcctgagacccgggcacgaccctgcgcgggagaggctcaagcgggacctt
ttccaatttaataagacggtggagcacggcttcccgcaccagcccagtgcccttggctac
agcccttccctgcacatcctggccatcggcacccgctccggagccgtcaagctctatggt
gccccaggggtggagttcatggggctccaccgggaaaacaatgctgtgatgcagatccac
tttctgcctggccagtgccaactggtcaccctgctagatgacaacagcctgcacctatgg
agccttaaggtcaaaggtggagtctcagagcttcaggaagatgagagtttcaccttgcgt
ggccccccaggggctgctcccagcgccacacagatcaccgtggccctgcctcattcctcc
cgagagctgctgtacctgggcactgagagtggcaatgtgttcgtggtgcaactgccgggc
ttccgcaccctggaggaccagaccatcagctcagacgcggtgctgcagcggctgccagaa
gaggcccgccaccggcgagtatttgagatggtggaggctctgcaggagcaccctcaagac
cccaaccaggtcctgattggctacagccggggtcttgtcgtcatctgggacctgcagggc
agccgtgtactctgccatttcctcagcagccagcaactggagaatgtcagttggcagcgg
gatggccgcctcattgtcacctgccactccgatggcagccattgccagtggcctgtgtcc
agcgagacccagcaacctgagcccctgcgcacctccatgccttacggtccctttccttgc
aaagctattaccaaaatcttctggctgaccaccaggcaggggttgcccttcaccgtcttc
cagggtggcatgccacgtgccagctatggggaccgccactgcatctctgtggtgcacaac
ggccagcagacagccttcgacttcacttcccgtgtcattgacttcaccgtcctggcggag
gctgaccctgcagcagcctttgacaacccctacgcccttgtggtgctggctgaggaagag
ttggtggtgattgacctgcagacagcaggctggccgcccgtccagccaccctacctggcg
tctctgcactgctccgccattacctgctcccaccacgtttccaacatccctctgaagctg
tgggagcgcatcattgctgccggcggccggcagaacgcacacttctccaccatggagtgg
cccatcgatggtggcaccagcctggccccaccaccaccccagagggacctgctgctcacg
gggcacgaggatggcacggtgcggttctgggatgcctcgggcgtctgcttgcgattgctg
tacaaactcagcacagcacgggttttcctcaccgacacggaccccagtgagaacctcaac
gcccagggcgaagatgagtggcctccactccgtaaggtgggctcctttgacccctacagt
gatgatccccggctgggcatccagaagatttttctctgcaaatacagtggctacctggct
gtggcaggcacggcagggcaggtgctagtgctggagctgaacgacgaggcggctgagcac
gccgttgagcaggtggaggccgacctgctgcaggaccaggagggctaccgctggaagggg
cacgagcgcctggccgcccgcccggggcccgtgtactttgatcccggctttcagcccttc
gtattggtgcagtgccagcccccggctgtggtcacctccttggccctgcactctgagtgg
cggcttgtggcctttggcaccagccacggctttggcctctttgaccaccagcagcggcgg
caggtctttgtcaaatgtaccctccaccccagcgaccaactagccctggagggcccactg
tcccgtgtaaagtccctcaagaagtccctgcgtcagtcattccgccggatgcgccgcagc
agagcgtctagccggaagcggcggccagctggccccccaggagagatgcaggcagcaagc
accaagcctgagcgaacaggactgcagaacatggagttggcacctgtgcagcgcaagata
gaggcccgctcggctgaagactccttcacaggctttgtccggaccctctactttgctgac
acctacctaagggacagctcccgccactgcccctcgctgtgggctggcaccaatgggggt
actgtctatgccttcgccctgcgtgtgccccctgctgagcggagaacggatgagctagtg
cgggcggagcaggccaaggagatccagctgatgcaccgagcacccgtggtgggtatcctg
gtgctcgacgggcacagcataccccttcctgagcccctggaagtggcccatgacctgtca
aagagcccagacatgcagggaagccaccagctgcttgtggtgtctgaggaacaattcaag
gtgttcacgctgcccaaggtgagtgccaagctgaagctgaagctgacggccctggagggc
tctagggtccgacgggttggcgtagcccacttcagcagctgtcgggccgaagattatggg
gagcaccatctggcggtcctcaccaacctgggcgacatccaggtggtctcgctgcccctg
ctcaagccacaggtgcgatacagctgcatccgccgggaggacgtcagcggcattgcctcc
tgtgtcttcaccaaatatggccaaggtttctacctgatttcaccctcagagtttgagcgc
ttttctctttccaccaagtggctggtcgagccccggtgcctggtggagtccgccaaaatg
aagaaccacagctgccccagcaatggcaatggccctggccttgagaaggccttgggccga
accaggaactcaggaagccaaagtgatggagaggaaaagaagcccggcccagtgatggag
catgcgctgctcaatgatgagcgagtcctgaaggaaatccagagcacactggagggggac
cgagggagctatggcaattggcgttctcaccggacggctgtgggatacagcctcagcagt
gggggagcagagtga
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integrated database retrieval system
