Sciurus carolinensis (gray squirrel): 124980773
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Entry
124980773 CDS
T08117
Name
(RefSeq) ATP-binding cassette sub-family B member 6
KO
K05661
ATP-binding cassette, subfamily B (MDR/TAP), member 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124980773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124980773
Transporters [BR:
ncar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
124980773
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Gene cluster
GFIT
Motif
Pfam:
MTABC_N
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_16
AAA_21
AAA_29
AAA
AAA_30
ATP-synt_ab
Zeta_toxin
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124980773
NCBI-ProteinID:
XP_047402627
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All DBs
Position
3:complement(164790372..164797373)
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AA seq
843 aa
AA seq
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MVIVGNYCEAEGPVGPTWAQDGLSPCFFYTLVPSTLMALGTLALVLALPCKGRERPVGAD
ALSWGTGPHIAPYGLQLLLATLQVALPLAGLAGRVGTARGARLPGYLLLASVLESVASAF
GLWLLVAERNQARQSLAMGVWIKFRHSPALLLLWTVAFAAENLALVSWNSPQWWWARADQ
GQQVQFGLWVLRYVVSGGLFVLGLWAPGLRPQSYTLQVLEEDQDVERNQAGSTDQQSTWR
DFGRKLRLLSGYLWPRGSPALQLVVLICLGLMGLDRALNVLVPIFYRDIVNLLTEKAPWS
SLAWTVTTYVFLKFLQGGGTGSTGFVSNLRTFLWIRVQQFTSRRVELRLFSHLHELSLRW
HLGRRTGEVLRIVDRGTSSVTGLLSYLVFNIIPTLADIIIGIIYFSMFFNAWFGLIVFLC
MSLYLILTIVVTEWRTKFRRAMNMQENATRARAVDSLLNFETVKYYNAEGYEVERYREAI
IKYQGLEWKSNASLVLLNQTQNLVIGLGLLAGSLLCAYFVSEQKLQVGDFVLFGTYIIQL
YMPLNWFGTYYRMIQTNFIDMENMFDLLKEETEVKDLPGAGPLHFQKGQIEFENVHFSYA
DGRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQT
SLRSHIGVVPQDTVLFNDTIANNIRYGRVTAGNNEVEAAAQAAGIHDAIMTFPEGYETQV
GERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCANRTTIV
VAHRLSTVVNADQILVIKDGCIVERGRHEALLSRGGVYADMWQLQQQGQEEVPEDTKPQT
IAQ
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggtgattgtgggcaactactgtgaggccgaagggccggtgggtccgacctgggctcag
gatggcctgagtccctgcttcttctacacgctggtaccctcgacgctgatggcccttggg
actctggccttggtgctggctcttccctgcaagggtcgggagcggccagttggcgcggac
gcgttgtcttggggaaccggcccccacatcgctccttacgggctgcagctgcttctggcc
acacttcaggtggcgctgcccctggctggcctggctggccgggtgggcaccgcccggggg
gcccggctgccagggtacctactgctggcttccgtgctggagagtgtggccagtgccttt
ggcctgtggctgcttgtggcggaacggaaccaggcacggcagagtttggccatgggcgtc
tggatcaagttcaggcacagccccgctctcctgcttctctggacggtggcgtttgcagcc
gaaaatttggcccttgtgtcttggaacagcccgcagtggtggtgggcaagggcggaccag
ggtcagcaggttcagtttggcttgtgggtcctgagatatgtggtttctggagggctgttt
gtcctggggctctgggcccctggacttcgtccccagtcctacaccttgcaggttcttgaa
gaagaccaagatgtagaaaggaaccaggctggatcaacagaccaacagtctacctggcga
gacttcggcagaaagctccgcctactgagtggctacctatggccccgggggagtccagct
ctgcagctggttgtactcatctgtctggggctcatggggttggaccgagcactcaacgtg
ttggtccccatcttctatagagacattgtgaacttgctgactgagaaggccccttggagt
tccctggcctggactgttaccacctatgtcttcctcaagttcctccaggggggtggcact
ggcagtacaggctttgtgagcaacctgcgcactttcctgtggatccgggtacagcagttc
acatcacggcgtgtggagctgcgcctcttctcccacttgcatgagttatcgctgcgttgg
cacctgggccgccgcacaggggaggtgctgaggatcgtggaccggggcacatccagtgtc
acagggctactcagctacttggtgttcaacatcatccccacgctggcggacatcatcatt
ggcatcatctacttcagcatgttcttcaacgcctggtttggcctcattgtgttcctgtgc
atgagtctttacctcatcctgactatcgtggtcactgagtggagaaccaagtttcgccgt
gccatgaacatgcaggaaaatgccacacgggcacgagcagtggactctctactaaacttt
gagacagtgaagtactacaacgctgagggttatgaagtggagcgctaccgagaggccatc
atcaagtatcagggtttggagtggaagtcaaatgcttcactggttttactgaatcagact
cagaacttggttattggacttggcctccttgctggctctctcctttgtgcatactttgtc
agtgaacagaaactacaggttggggactttgtgctatttggcacttacatcatccaactg
tacatgcccctcaactggtttggcacctactacaggatgatccagaccaacttcattgac
atggagaacatgtttgacctgctgaaagaagaaacagaagtgaaggaccttcctggagca
ggaccccttcactttcaaaagggccagattgagtttgagaatgtacacttcagctatgct
gacgggcgggagaccctgcaagatgtgtccttcaccgtgatgcctggacagacactggct
ttggtgggcccatctggggcagggaagagcacaattttgcgccttctgtttcgtttctat
gacattagctctggctgcatccgaatagatgggcaggacatttcacaggtgacccagaca
tctctccgatcccacattggagttgtgccccaggacactgtcctcttcaatgacaccatt
gccaacaacatccgttatggccgtgttactgctgggaacaatgaggtagaagctgctgca
caggctgcaggcatccatgatgctatcatgacattccctgaagggtacgaaacccaggtg
ggtgagcgtggactgaagctaagcggtggggagaagcagcgggttgccatcgctcgcacc
attctcaaagctccagacatcattctgctggatgaggcaacgtcagcactggatacatct
aatgagagggccatccaggcttctctggcaaaagtgtgcgccaaccgcaccaccatcgtg
gtggcacacaggctctccactgtggtcaatgctgaccagattcttgtcatcaaagatggc
tgcatcgtggagagaggacggcacgaggcgctgttgtcccgaggtggggtatatgctgac
atgtggcagctgcagcagcagggacaggaggaagtccctgaagacactaagccccaaacc
atagcacagtga
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