Sciurus carolinensis (gray squirrel): 124980802
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Entry
124980802 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2-like
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124980802
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124980802
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124980802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
SWIM
ZZ
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf_RING-like
Motif
Other DBs
NCBI-GeneID:
124980802
NCBI-ProteinID:
XP_047402677
LinkDB
All DBs
Position
3:complement(135180225..135197476)
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AA seq
636 aa
AA seq
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MLRGGYRPSERRRHLSDSLSWQQDQALSSSIYLLRQMGPTGFLLREEAPEHRDFRVFLGN
PHVCNCSTFLKKGELCKHICWVLLKKFKLPRNHESAFQLGLVEGEITDLLRGIHRVQTPQ
PGTGDETAHVKEDGYIKQKEIDSEDICSICQEVLLEKKLPVTFCRFGCGNNFHIKCMKIL
ANYQNTISNTSTLKCPLCRKEFAPLKLVLEEFQNATKLVTTSEKERLNKHLGIPCNNCKQ
FPIEGKCYKCTECIEYHLCQECFDSCYHLSHTFIFREKRNQRWRSLDKRLDEGVKYLDVK
NEIEEELLHVQEKQGQVYTPKHVVKSLPLLLITKNSKLLAPGYQCRLCLKSFHLGQHIRL
LPCTHKFHRKCIDNWLFHKCNSCPIDGQVIYNPLVWNSSAVNGQAHQSASNTDIAHLSKQ
EEPKLFVPGTGLVLKPNELGILPSISQCNFEKLNTLQNPIDTYQNITIDDLCSVKLGDSN
SRKLIYKHKINQQFPRHLQHLPAESFGEISSQTFLPSIVHKNIMCPTRVESPRSNENFHI
GQNQKVAKGCKHNTRDPKKTLGTKIREDNRKSNTLFPEDLNLIINWGKTKYSSPKRYNNC
MGKIRKKCSHLSRRPVSHPLNTKSAELSLVMEGVQL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcggaggctacaggccctctgaaaggcgaagacacttgagcgacagcctcagc
tggcaacaagaccaggcgttgagcagcagcatctacctcctacgacagatgggccccacc
ggcttcctgctgagggaggaagcgccggagcaccgggatttccgagtttttctaggaaat
cctcatgtttgtaactgttccacatttctgaaaaaaggggagctttgtaagcatatatgt
tgggtcttgttgaaaaaattcaagctcccaaggaatcatgaatctgctttccagttaggt
cttgtggaaggagaaataactgacttgctgcgggggatacatcgagttcaaactccccaa
ccaggaacaggtgatgaaactgcacatgtgaaagaagatgggtacattaaacagaaggaa
attgattcagaggatatctgctctatttgtcaagaggtgcttttagagaaaaagcttcct
gtcacattttgcagatttggctgtggcaataatttccatataaaatgcatgaagatctta
gccaattatcagaatacaatatcgaacacttccacgttgaaatgtcctctgtgcaggaag
gagtttgcacctcttaaacttgttttggaagaatttcagaatgctaccaaacttgtgact
acatctgagaaagaacgactgaacaaacaccttggaattccctgtaataactgtaaacaa
tttccaattgagggaaaatgttataagtgtaccgaatgtatagaatatcacttatgccag
gaatgctttgatagctgctaccacctttctcacacatttatattccgtgagaagagaaac
caaagatggagatctctagacaagagactggatgaaggtgtgaaatatttagatgttaaa
aatgagatagaagaagagctgctacatgttcaagaaaagcaaggccaggtttacacacca
aaacacgttgtaaagtcactacctctcctactgattacaaagaatagtaagctgcttgct
ccagggtaccagtgtcgactctgtttgaagtcatttcatcttggtcaacacataagactg
ctaccatgtactcacaagtttcataggaagtgtattgacaattggttattccacaagtgc
aattcatgccctattgatggacaagttatatataacccgttagtctggaacagttcagca
gtgaatggacaagcccatcagtctgcttcaaacacagacatcgcccatctgtcaaagcag
gaagaaccaaaactttttgttcctggtactggattagtcttaaaaccaaatgaacttgga
attttacctagcatatctcaatgtaattttgaaaaattgaatacacttcaaaatccaata
gatacttatcagaatataacaatagatgatctatgctctgtcaaattaggtgattcaaat
tcaagaaaattaatctataaacataaaattaaccaacagttccccaggcatcttcaacat
ctacccgctgaatcttttggagagatatcatctcaaacatttcttccttccattgtacat
aagaatattatgtgtcccactagagtagaaagcccacgtagcaatgaaaacttccatatt
ggtcaaaatcaaaaggtggccaaaggctgtaaacataatacccgtgatccaaaaaagact
cttggtactaaaataagagaagacaataggaaatcaaatactttatttccagaagattta
aatcttattatcaattgggggaaaaccaaatatagttcacctaaaaggtataataattgc
atggggaaaattaggaaaaaatgtagtcacctatcaagacgccctgtatctcatccttta
aatacaaaaagtgctgaactatctttagtaatggaaggagttcagttgtga
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