Sciurus carolinensis (gray squirrel): 124980817
Help
Entry
124980817 CDS
T08117
Name
(RefSeq) TANK-binding kinase 1-binding protein 1 isoform X1
KO
K12652
TANK-binding kinase 1-binding protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124980817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBD
STAC2_u1
TolA_bind_tri
CT_C_D
Seryl_tRNA_N
Knl1_RWD_C
Motif
Other DBs
NCBI-GeneID:
124980817
NCBI-ProteinID:
XP_047402715
LinkDB
All DBs
Position
3:23883453..23900348
Genome browser
AA seq
627 aa
AA seq
DB search
MESMFEDDISILTQEALGPSEVWLDGPGDSSLGGDMCSASHFALITAYGDIKERLGGLER
ENATLRRRLKVYEVKYPLISDFGEEHGFSLYEIKDGSLLEVEKVSLQQRLNQFQHELQKN
KEQEEQLGEMIQAYEKLCVEKSDLETELGEMRALVETHLRQICGLEQQLRQQQGLRDAAF
RSLSPPPAPAPPCADLDLHYLALRGGSALGHAGWPGSTPSVSELERRQLEEALEAAQGEA
RGAQLREEQLQAECERLQGELKQLQETRAQDLATNQSERDMAWVKRVGDDQVNLALAYTE
LTEELGRLRELSSLQGRILRTLLQEQARSGGQRHSPLSQRHSPAPQCPSPSPPARAAPPC
PPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPPCQSPSPQRRSPVPPS
CPAPQPRPPPPPPPGERTLTERAYAKPPSHHVKAGFQGRRSYSELAEGAAYAGASPAWLQ
AEAATLPKPRAYGGELYGPGRPLSPRRAFEGIRLRFEKQPSEEEEWAMPSSPPSPEAGTI
RCASFCAGFPIPESPAAAAYAHAEHAQSWPSINVSGEHTCAARTWRCRAKSPVLTWGPCP
SVADGNSGLRHPQLPPLPAGFSCRVPG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatgtttgaggacgacatcagcatcctgacccaggaggccttggggcccagc
gaggtgtggctggatggtcctggagattcctcgttgggtggggacatgtgctctgcctcc
cactttgccctcatcaccgcctacggggacatcaaggagcggctggggggcctggagagg
gagaatgccaccctccgtcgccgcctcaaagtctatgaggtcaagtacccattgatcagt
gactttggagaggaacacggcttctctctgtatgaaatcaaggatggctccctgctggag
gtggagaaagtcagtctgcagcaacggctcaaccagttccaacatgagttgcagaagaac
aaggagcaggaagaacagctcggggagatgattcaggcttacgagaagctctgtgtggag
aagagcgacttggagacagagctgggggagatgcgggccctggtagaaacccacctgcgg
cagatttgtggtttggaacaacagctgcggcagcaacaaggcctccgggatgcagccttc
cgtagcctgagccctccgcctgcccctgccccaccctgtgctgatctggacctgcactac
ctggcactgagagggggatctgccttaggtcatgcaggctggcctggctccacaccgagt
gtgagtgagctggagcgtcggcagctggaagaggccctggaggctgcccagggagaagcc
cggggggctcagctccgagaggagcagctccaggcggaatgtgaacgactgcagggggag
ttgaagcagctgcaggagacccgggcccaggatctggccaccaaccagtcagagcgggac
atggcgtgggtgaagagagttggggacgatcaggtgaatttggcgctggcctacaccgaa
ctgacggaggagttgggccggcttcgtgagttgagttccctgcaggggaggatcctgaga
accttgttgcaggagcaggcccggagtggcggccagaggcactcgccgctgtcgcagcgc
cattccccggccccccagtgcccctcgccctctcctcctgcccgagcggcgccgccatgc
cccccgtgccagtccccggtcccgcagcgccgctctccggtgcccccgtgcccctcaccg
cagcagcgccgctcgccggcgtcgccctcctgcccatcgccggtcccgcagcgccgctcg
ccggtgccgccgccgtgccagtctcccagcccgcagcgccgctcgccggtgccacccagc
tgtccggccccgcagccccggccgcccccgccgccgccacctggggagaggacgctgacc
gagcgcgcctacgccaagccgcccagccaccacgtgaaggctggcttccagggtcgccgc
agctactcggagctggcggagggcgcggcctacgcgggcgcctccccagcctggttgcag
gcggaggcggccacactccccaagccccgcgcctatggcggcgagctctatggccccggc
agacccctgagcccgcggcgcgccttcgagggcatccggctgcgctttgagaagcagccc
tccgaggaggaggagtgggccatgccctccagccctcccagccctgaggcgggcaccatc
cgctgcgcctccttctgcgcaggcttccccatcccagagtcgccggccgctgcagcctat
gcccacgcagagcacgcgcagtcctggccatccatcaacgtgagtggggaacacacctgc
gcggcccgcacctggagatgcagggccaagagccccgtcctcacctggggaccctgccct
tcggttgctgatggaaacagtgggctccgacatccgcagttgccccctctgccagctggg
ttttcctgtcgggtacccggatga
DBGET
integrated database retrieval system
