Sciurus carolinensis (gray squirrel): 124980870
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Entry
124980870 CDS
T08117
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar01522
Endocrine resistance
ncar04350
TGF-beta signaling pathway
ncar04919
Thyroid hormone signaling pathway
ncar05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124980870
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
124980870
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124980870
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
124980870
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124980870
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124980870
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124980870
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
124980870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124980870
NCBI-ProteinID:
XP_047402823
LinkDB
All DBs
Position
3:complement(43581020..43749653)
Genome browser
AA seq
2542 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPAHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQASQLLQQQ
QQQQLRRRPSLLSEFHPGSDRPQERRTGYEQFHPGPSTVDHDSLESKRPRLEQVSDSHFQ
RVSAAVLPLVHTLPEGLRSSADAKKDPAFGGKHEAPSSPISGQPCGDDQNASPSKLSKEE
LIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTGVPARRMMKNQVMRKKLIL
FFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRK
QREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAE
QRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSV
PDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKEEDKAEKTEKKEE
EKKDEEEKDEKEDSKENTKEKDKMEATTEETEEREQATPRGRKTANSQGRRKGRITRSMT
NEAAAASAAAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAI
AKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKASRKPREERDVSQCESVASTVSAQE
DEDIEASNEEENPEDSEGAENSSDTESAPSPSPVEAVKPSEDSSENAASRGNPEPVAEVD
STTETAPSASPSSAVPSTKPAESESVETQVNDSISVDTAEPMDVDHQEHSAEAGSALDPP
PTTKADSVDVEMRVPENSASKGDGDTKERDLERGNEKTEPRDEDLVVTQQINVQRPEPQS
DNDSSATCSADEDVDGELERQRMFPMDTKPSLLNPTGSILVSSPIKPNPLDLPQLQHRAA
VIPPMVSCTPCNIPLGTPVSGYALYQRHIKAMHESALLEEQRQRQEQIDLECRSSTSPCG
TSKSPNREWEGKSVAYMPYAEVKRALEQEAQMHSTAARSASPCRLSPKEVSKAAPRPDMS
TARYSVPPVLQPAPHQVITNLPEGVRLPTTRPTRPPPPLIPSSKTTMASEKPSFIMGGSI
SQGTPGTYMTSHNQASYTQETAKPSVGSISLGLPRQQESTKSATLPYIKQEEFSPRSQNS
QPEGLLVRAQHEGVVRGTTGAIQEGSITRGTPTSKISVESIPSLRGSITQGTPALSQAGI
PTEALVKGSISRLPIEESSPEKGREEASSKGHVIYEGKSGHILSYDNIKNAREGTRSPRT
AHEVSLKRSYESVEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHSDLKERTVLSGSIM
QGTPRAPTESFEDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGRSIHEIPRQ
DILTQESRKTPEVVQSTRPIIEGSISQGTPIKFDSNSGQSAIKHNVKSLITGPSKLPRVI
PPLEIVPENIKVVERGKYEDVKAGEPVRSRHTSVVSSGPSVLRSTLHEAPKAQLSPGIYD
DSSARRTPVSYQNTMSRGSPMMNRTSEVTISSSKSTNHERKSTLTPTQRESIPAKSPVPG
VDPVVSHSPFDPHHRGSAAGEVYRSHLPTHLDPAMPFHRALDPAAAAYLFQRQLSPTPGY
PSQYQLYAMENTRQTILNDYITSQQMQVNLRPDVARGLSPREQPLGLPYPATRGIIDLTN
MPPTILVPHPGGTSTPPMDRITYIPGTQITFPPRPYNSASMSPGHPTHLAAAASAERERE
REREKERERERERITVASSDLYLRPGSEQPGRPGSHGYVRSPSPSVRTQEPMLQQRPSVF
QGTNGTSVITPLDPTAQLRIMPLPAGGPSISQGLPASRYNTAADALAALVDAAASAPQMD
VSKTKESKHEAARLEENLRSRSAAVSEQQQLEQKTLEVEKRSVQCLYTSSAFPSGKPQPH
ASVVYSEAGKDKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKDARERGSQSS
DSSSSLSSHRYETPSDAIEVISPASSPAPPQEKLQAYQPEIVKANQAEPDPTRQYEGPLH
HYRTQQESPSPQQQLPPSSQGDGIGQVPRTHRLITLADHICQIITQDFARNQVSSQPPQQ
PPTSTFQNSPSALAVTPVRTKTSSRYSPESQSQSVLHQRPGSRVSPENLVDKSRGSRPGK
SPERSHVPSEPYEPISPPQVPAVHDKQDSMLLLPQRGTEPTEQRNDSRSPGSISYLPSFF
TKLENTSPMVKSKKQEIFRKLNSSGGGDSDMDEKTETQRGLITGAGYITTAAQPGTEIFN
LPAVTTSGSVSSRSHSFADPASNLGLEDIIRKALMGSFDDKVEDHGVVMPQSVGVVPGSA
STSVVTTNETRRDEGDPSPHSGVCKPKLMSKSNSRKSKSPIPGQGYLGTERPSSVSSVHS
EGDYHRQTPGWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTPIACAPSAVNQAAPHQQNR
IWEREPAPLLSAQYETLSDSDD
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggttatcctcccaaccaaggagcattcagcacagaacaaagtcgttat
cctgcccactctgttcagtacacctttcccagcacccgccaccagcaggagtttgcagtc
cctgactatcgctcttctcatcttgaagttagtcaggcatcacagctcttgcagcaacag
caacagcagcaacttcgaagacgaccttccttgctttcagaatttcacccaggttctgac
aggcctcaagaaaggagaactggatatgaacagtttcacccaggcccatccacagtggat
catgattcactggaatccaagagaccacgtctggagcaggtttctgattcccattttcag
cgtgtcagtgctgcggttttacctttagtgcacacactgccagaaggattgaggtcttct
gcagatgctaagaaggatccagcatttggaggcaaacatgaagctccatcctctccaatc
tctggacaaccatgtggagatgatcaaaatgcttccccttcaaaactttcaaaagaagag
ttaatacagagtatggatcgtgtagatagagaaattgcaaaagtagaacagcagatcctt
aaactgaaaaagaaacaacaacagctcgaagaagaagcagctaaacctcctgagccagag
aagcctgtgtcccctcctcctgtggagcagaaacaccgcagtattgttcaaattatttat
gatgaaaatcggaaaaaagcagaagaagctcataaaatttttgaaggtcttggccccaaa
gttgaactgccactctataaccagccatcagatacaaaggtgtaccatgagaacatcaag
actggagtacctgcaaggcgcatgatgaaaaaccaggtgatgaggaaaaaactcatttta
ttttttaaaagaagaaatcatgcaagaaaacaaagggaacaaaaaatctgccaacgttat
gatcagctaatggaagcatgggagaaaaaagtggacagaatagaaaataatccccggagg
aaagctaaagaaagcaaaacaagggagtactatgaaaagcagtttccagaaattcgaaaa
caaagagaacagcaagaaagatttcagcgagttgggcagaggggagctggtctttcagcc
accattgctaggagtgaacatgagatttctgaaattattgatggtctctccgagcaggag
aataatgagaaacaaatgcggcagctctctgtgatcccacctatgatgtttgatgcagaa
caaagacgggtcaagttcattaacatgaatggacttatggaggaccctatgaaggtttat
aaagataggcagtttatgaatgtttggactgaccacgagaaggagatctttaaggacaag
tttatccagcatccaaaaaactttggactaattgcatcctacttggaaaggaagagtgtt
cctgattgtgttttatattactatttaaccaagaaaaatgagaattacaaagccctggta
agaaggaattatggaaaacgcagaggcagaaatcagcagcaaattgcccgaccctcacaa
gaagaaaaagtagaagaaaaagaagaggataaggcagaaaaaacagaaaaaaaggaagaa
gaaaagaaagatgaagaggaaaaagatgagaaggaggactctaaagaaaataccaaggaa
aaggataagatggaagctacaacagaagaaactgaggagagagaacaggccacacccagg
gggcgaaagactgccaacagtcaaggccgcaggaagggccgaatcaccagatccatgaca
aatgaagctgcagctgccagtgctgcagctgcagcagccactgaagagcccccaccacct
ctgccaccaccaccagaacccatttccacagagcctgtggagacctctcgatggacagaa
gaagaaatggaagttgctaaaaaaggcctagtagaacatggtcgtaactgggcagcaatt
gccaaaatggtgggaactaagagtgaagctcagtgtaaaaacttctattttaactataaa
aggcgacacaatcttgacaacctcttgcaacagcataaacagaaagcttcacgaaaacct
cgtgaagaacgtgatgtatctcaatgtgaaagtgttgcttccactgtttctgctcaggaa
gatgaagatattgaagcctccaatgaagaagaaaatcccgaagatagtgaaggtgctgaa
aatagttctgatacagaaagtgctccttctccttcaccagttgaagctgtcaagcccagc
gaagacagcagtgaaaatgctgcttctcgaggaaatcctgaacccgtggctgaggtggac
tccactacggaaacggcaccgagtgcatctccctcttcagcagttccaagtacaaaacca
gctgaaagtgaaagtgtggagacccaggtgaatgacagcatcagtgttgacacagcagag
ccaatggatgtagaccatcaggagcacagtgctgaagcgggttcggctcttgatccacca
cccactaccaaagcagactctgtggatgttgaaatgagggtgcctgaaaacagtgcatct
aaaggtgatggagataccaaagaaagagacttagagagaggcaacgagaagacagagcct
agggatgaagatttggtggtgactcagcagataaatgtccaaagaccagagccccagtca
gataatgattccagtgccacgtgcagtgctgatgaagatgtggatggagagctcgagagg
cagagaatgtttcctatggacacaaagccttcattgttaaaccctactggatctatacta
gtttcatccccaataaaaccaaatccgttggatctgccacagcttcagcatcgagctgct
gttataccaccaatggtttcctgcaccccttgtaatataccacttggaacccctgtgagt
ggctatgctctctaccagcgacacatcaaggcaatgcatgagtcagcactcctagaggaa
cagcggcagaggcaagaacaaatagatttggaatgtagaagttctacaagtccatgtggc
acttccaagagtccaaacagagaatgggaaggaaaatcagtcgcctatatgccttatgct
gaggtcaaacgtgctctagaacaggaagcacagatgcacagtaccgcagcaaggtcagcc
tcaccgtgtaggctatctccaaaggaagtcagtaaagccgctccacggcccgatatgagt
acagcccgctatagtgtcccgccagttcttcaacctgctccacatcaagtgataactaat
ctccctgaaggcgttcggcttccgacaactcgaccaaccaggccaccaccacctcttatc
ccatcatctaaaaccacaatggcttcagaaaaaccatcttttataatgggaggctccatc
tcacagggcacacctggcacttacatgacttctcataatcaggcttcctatactcaagaa
acagctaagccctctgtggggtctatctctcttggattgccaaggcagcaggaatccacc
aaatcagcaactttgccctatatcaagcaggaagaattttctccccggagccaaaattca
cagcctgagggtttattggtcagggcccaacatgaaggtgtggtcagaggtaccacagga
gctatccaagaaggaagtataactcgaggaactccaaccagcaaaatttcagtggagagt
atcccttctctacgtggctctatcactcaggggaccccagctctgtcccaggctggcata
ccaactgaagctttggtgaaggggtccatttctaggctacccattgaagagagcagtcct
gagaaaggcagagaagaagcttcatccaaaggccatgttatttatgaaggcaaaagtgga
cacattttatcatatgataatattaagaatgccagagaagggactaggagtcccagaaca
gcacatgaagtcagtttaaaaagaagctatgaatcagtggaaggaaatataaagcaagga
atgtcaatgagggagtctcctgtatcagcaccattagagggactgatatgccgggcatta
cccagggggagccctcattctgacctcaaagaaagaactgtgttgtctggctctataatg
caaggcacaccaagagcaccaactgaaagtttcgaagatggccttaaatatcccaaacag
attaaaagggaaagtcctcccatacgagcatttgagggtgccattaccaaaggaaaacca
tatgatggcatcaccaccatcaaagaaatgggacgttccattcatgagattccacggcaa
gatattctaactcaggaaagccgaaaaactccagaagtggtccagagcacgaggccaata
attgagggttctatttcccagggcacaccaataaagtttgatagcaactcaggtcaatct
gccatcaaacacaatgtcaaatccttaatcacgggtcctagcaaactaccccgtgtaata
cctccactagaaatcgtaccagagaacataaaagtggtggaacggggaaaatatgaggat
gtgaaagcaggcgagccagtgcgttcccgacacacatcggtggtgagctccggcccctct
gttctcaggtccacgcttcatgaagctccaaaagcacagctgagcccgggaatttatgat
gactccagtgctcggaggacccctgtgagttatcagaacaccatgtccagaggctcacca
atgatgaacagaacttctgaagttacgatctcttctagcaagtctaccaatcatgaaagg
aagtcaacactgacccctacccaaagggaaagtataccagctaaatctccagtgcctggg
gtagatcctgttgtgagccacagcccatttgatccccaccacaggggcagtgctgcaggg
gaagtttatcggagccatcttcccacacacttggatccggccatgccctttcacagggct
ctggatcctgcagctgctgcttacctgtttcagagacagctttcaccaactccaggctac
ccaagtcagtatcagctttatgcaatggagaacacaagacagacaatcctaaatgattac
attacctcacaacagatgcaagtgaacttgcgcccagatgtagccagaggactttcccca
agagagcaaccactgggtctcccatatccagcaacaagaggaatcattgacctgaccaat
atgcctccaacaattttagtgcctcatccagggggaacaagcactcctcccatggacaga
atcacttatattcctggtacacagattactttccctcccaggccatacaattctgcttct
atgtctccaggacatccaacacaccttgcagcagcagcaagtgctgagagggagagggag
cgggagcgggagaaggaaagggagcgtgaacgggagcggatcactgtagcttcttcagac
ctctacctgcgaccaggctcagaacagcctggcagacctggcagtcatggatatgttcgc
tccccttccccttcagtaagaactcaggagcccatgttgcagcaaagacccagtgttttc
cagggaaccaatggaaccagtgtaatcacacctttggatccaactgctcagctacgaatc
atgccactgcctgctgggggcccttcaataagccaaggcttgccagcctcccgctacaac
actgctgcggatgccctggctgctcttgtggatgctgcagcttctgcaccccagatggat
gtttccaaaacaaaagagagtaagcatgaagctgccaggttagaagaaaatttgagaagc
aggtcagcagcagttagtgaacagcagcagctagagcagaaaaccctggaggtggagaag
agatctgttcagtgtctgtacacttcttcagcctttccaagtggcaagccccagcctcat
gcttcagtagtgtattctgaggctgggaaagataaagggcctcctccaaaatccagatat
gaggaagagctaagaacccgagggaagactaccattactgcagctaacttcatagacgtg
atcatcacccggcaaattgcctcggacaaggatgcaagggaacgtggctctcaaagttca
gactcttctagtagcttatcttctcacaggtatgaaacacctagtgatgctatagaagtc
ataagtcctgccagctcacctgcaccgccccaggaaaaactgcaggcctatcaaccagag
attgttaaggcaaatcaagcagaacctgatcctaccagacagtatgaaggaccactgcat
cactatcgaacccagcaggaatcaccatctccacaacagcagctgcccccttcttcacag
ggagatgggataggccaagtgcctaggacccatcggctgatcacacttgctgatcacatc
tgtcaaattatcacacaagattttgctagaaatcaagtttcctcacagcctccccagcag
cctccaacttctacattccagaattcaccatctgctttggcggttacacctgtgaggact
aaaacctcaagtcgctacagcccagaatcccagtctcagtctgtccttcatcaaagacca
ggttctagagtctctccagaaaatcttgtggacaaatcccggggaagcagacctgggaaa
tctccagagaggagtcacgtcccttcagagccctacgagcccatctctccaccccaggtt
ccagctgtgcacgacaaacaggacagcatgttgctgttacctcagaggggcacggagcct
acagagcagagaaatgattcccgctcaccagggagtataagctacttgccttcattcttc
accaagcttgaaaatacatcacccatggttaaatcaaagaagcaggagatttttcgtaag
ttgaactcttctggtggaggtgactctgatatggatgagaaaactgagactcagagaggt
ttaataacgggcgcaggttacataactacggctgctcagccaggaactgagatcttcaat
ctgccagcagttactacatcaggctccgtcagctctagaagtcattcttttgctgatcct
gctagtaatcttggtctagaagatattattaggaaggctctcatgggaagctttgacgac
aaagttgaggatcatggagttgtcatgccccagtctgtgggagtagtgcctggtagtgcc
agcacctcagttgtgaccaccaatgagacccggagggatgaaggagacccatcacctcat
tcaggagtttgcaaaccaaagctgatgagcaagtcaaacagcaggaagtctaaatctcct
atccctgggcaaggatacttaggaactgaacggccctcatcagtctcctctgtacattca
gaaggtgattaccatagacagacaccaggctgggcctgggaagacaggccctcgtcaaca
ggctcaactcagtttccttataaccctctgaccatgcggatgctcagtagcacaccaccg
acacccattgcatgtgctccctctgctgtgaaccaagcagctcctcaccaacagaaccgg
atctgggagcgggagcctgccccgctgctctctgcacagtatgagacactgtccgacagt
gatgactga
DBGET
integrated database retrieval system
