KEGG   Sciurus carolinensis (gray squirrel): 124980915
Entry
124980915         CDS       T08117                                 
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
  KO
K08034  transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04950  Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04950 Maturity onset diabetes of the young
    124980915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124980915
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    124980915
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N Homeodomain Homeobox_KN RHH_ERCC6L2 APP1_cat
Other DBs
NCBI-GeneID: 124980915
NCBI-ProteinID: XP_047402931
LinkDB
Position
3:complement(37129896..37182378)
AA seq 558 aa
MVSKLTSLQQELLNALLSSGVTKEVLIQALEELLPSPNFGVKLETLPLSPGSGADPDTKP
VFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSQGPGQSDDACSEPTNKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEAFRQKLAMDAYSSNQTHSLNPLLTHSSPHHQPSTSPPNKLPGVRYSQQGNNEV
TSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMQISVSGGGLPPVSTLTNI
HSLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVASSLAALQPVQFSQQLH
SPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSS
ISTLTNMSSSKQCPLQAW
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggtgtcgaagctcacatcgctgcagcaagaactcctgaacgccctgctgagctccggg
gtcaccaaggaggtactgatccaggccttggaggagttgctgccatccccgaacttcggg
gtgaaactggagacgctgcccctttcccctggaagcggggcagatccggacaccaagccg
gtcttccataccctcaccaatggtcacgccaagggccgcttgtccggggacgagggctcc
gaagacggcgacgactatgacacccctcccatcctcaaggagctgcaggctctcaacacc
gaggaggcagcggagcagcgggccgaggtggaccgaatgctcagtgaggacccttggagg
gctgccaaaatgatcaaaggctacatgcagcaacacaacatcccccagagggaagtggtt
gatgtcacgggtctgaaccaatcacacctctcccagcatctcaacaagggcacccctatg
aagacccagaagcgtgctgccctgtacacctggtacgtcagaaagcaacgggagatcctc
cgacagttcaaccagacagtccagagctctggaaatatgacagacaaaagcagtcaggat
cagctgctgtttctctttccagagttcagtcaacagagccaggggcctgggcagtccgac
gacgcctgctctgagcccaccaacaagaagatgcgacgtaaccggttcaaatgggggccc
gcgtcccagcaaatcttgtaccaggcctacgaccggcaaaagaaccccagcaaggaagag
agggaggccttagtggaggagtgcaacagggcagaatgtttgcagcgaggtgtctccccc
tctaaagcccatggcctgggttccaacctagtcaccgaggtccgtgtctacaactggttt
gcaaaccgtaggaaggaggaggcattccggcagaagctggccatggatgcctatagctcc
aaccagacgcacagcctgaaccccttgcttacgcacagctccccccaccaccagcccagc
acctctcctccaaacaagctgccaggagtacgctacagtcagcagggaaacaatgaggtc
acttcctcttcaacaatcagtcaccatggcaacagcgccatggtgaccagccagtcagtt
ttacagcaagtctccccagccagcctggaccccggccacaatctcctctcacctgatggt
aaaatgcagatatcagtttcaggaggaggtttgcccccggtcagcaccttgaccaacatc
cacagcctctcccaccacaatccccagcaatctcaaaacctcatcatgacccccctgtct
ggagtcatggccattgcacaaagcctcaacacctcccaagcacagagcgtcccagtcatc
aacagtgtggccagcagcctggcagccctgcagcctgtccagttctcccagcagctgcac
agccctcaccagcagccccttatgcagcagagccccggcagccacatggcccagcaacct
ttcatggctgctgtgactcagctgcagaactcacacatgtatgcacacaagcaggagccc
ccccagtattcccacacctcccggtttccatctgcgatggtggtcacagacaccagcagc
atcagtacactcaccaacatgtcttccagtaaacagtgtccactgcaagcctggtga

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