Sciurus carolinensis (gray squirrel): 124980959
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Entry
124980959 CDS
T08117
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124980959
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Others
EARP complex
124980959
Endosome - Golgi transport
Tethering complex
GARP complex
124980959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
Laminin_II
Syndetin_C
hAT-like_RNase-H
NBD94
COG3_N
NFRKB_winged
COG5_N
FUSC
XhlA
ING
Motif
Other DBs
NCBI-GeneID:
124980959
NCBI-ProteinID:
XP_047403018
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All DBs
Position
3:complement(62301772..62458898)
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AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWYMTERIAVEFCHVTRAELAKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPPSTNPFLEDEPAPEIEELAIEKGELDQPKKPKVPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSNMLELLRQRLPTPPSGAEGSSSLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaggaactggagttcgtggaggaactggaagccgtgctgcagctcact
cctgaggttcaactagccattgagcaggtatttccaagccaggatcctttagatcgagca
gatttcaatgctgttgaatatatcaataccctgttcccaacagaacaatctctggcaaat
atagatgaagttgtgaacaaaattagactgaaaataaggagactggatgacaatattcga
actgttgtaagaggacagacaaatgtggggcaggatggaaggcaagcacttgaagaggcc
cagaaagctattcaacaactcttcggcaaaatcaaagatatcaaagacaaagcagaaaaa
tcggagcaaatggtcaaagaaatcacccgtgatatcaagcagttagatcatgccaaacgc
cacctgaccacctcaatcacgacgctaaaccacctgcacatgttggcaggtggtgtggat
tccctcgaagccatgaccaggcgcaggcagtatggagaagttgctaatctccttcagggt
gtaatgaatgttctggaacacttccacaagtatatgggaattccacagatacggcagctt
tctgaaagagtgaaggctgcacagaccgagctgggacagcaaattctggcagatttcgag
gaggcatttccttctcagggtaccaagaggccaggaggacccagtaatgtcctgcgagat
gcatgtctggttgctaatattttggaccccagaatcaagcaagaaattatcaagaagttt
attaaacaacatctgtcagagtatctagtactttttcaagaaaatcaagatgttgcctgg
ctggacaaaattgacagacgctatgcctgggtgaaacgccagcttgtggactatgaggag
aaatatggacgaatgtttccacgggagtggtatatgaccgagagaattgcagtagaattc
tgccatgtgacaagggcagaacttgctaaaatcatgcgtgccagagctaaggaaatcgag
gtgaaattacttctttttgctattcagagaacaactaactttgaagggtttcttgcaaaa
cgcttctccggttgcaccttgaccgatggaaccctgaaaaagctcgagtctccaccacca
tctaccaaccctttcctggaagatgagccagccccagaaattgaggagctggcaatcgag
aagggagaattagatcaacccaagaagcctaaagtcccagacaacccatttcatggcatt
gtttccaagtgttttgagcctcatctctatgtgtatattgagtcccaggacaaaaacctt
ggagagctgattgataggtttgtggctgatttcaaagcccaggggccacctaagcccaac
actgacgaggggggtgctgtgcttcccagctgtgctgacctcttcgtctactacaagaag
tgcatggtacagtgctcacagctcagtactggagaaccaatgatcgccctgaccaccatt
ttccagaagtacctccgagaatacgcctggaaaatcctctctggcaacctgcccaaaacc
acaaccagcagtgggggcctgaccatcagcagcctcctcaaggaaaaggagggctcagaa
gtggccaagttcactctcgaggagctctgcctcatctgcagcatcctgagcacagcagaa
tactgtctggccaccacccagcagttagaagaaaaactcaaagaaaaagtcgatgtaagt
ctgaccgaacgaatcaatctcacaggagaaatggacacgttcagcactgtcatctccagc
agtattcagttgctggttcaggatctagatgcggcctgtgatcctgccctgactgccatg
agcaagatgcagtggcagaatgtggaacatgttggtgaccagagcccctatgtcacctct
gtcattcttcacattaagcagaatgtccccatcatccgtgacaacctggcttccacacgg
aaatacttcactcaattctgcatcaaatttgcaaactcctttattcccaaattcatcacc
cacctcttcaagtgcaaaccaattagcatggtgggagcagaacagctcctgctggacacc
cactccctgaagatggtcctgctcgatctcccttccattggctcacaggtggtgaggaaa
gcccctgccagttacactaagattgttgtgaaaggcatgacccgggctgagatgatcctc
aaggtagtgatggccccccatgaaccattggtggtgtttgtagacaactacatcaaactc
cttacggactgcaacacagaaaccttccagaagatactagacatgaaggggctgaagaga
agtgagcagagcaacatgctggaactcctgcgccagagactccccaccccgccctcaggg
gcagaaggctccagctccttgtccctgatggctcctacaccagaacaggaatcatctcgc
atccgcaagctggagaaactaattaagaagagactgtag
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