Sciurus carolinensis (gray squirrel): 124980978
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Entry
124980978 CDS
T08117
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
ncar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124980978
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124980978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124980978
Spliceosome [BR:
ncar03041
]
Common components
Common spliceosomal components
SR proteins
124980978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124980978
NCBI-ProteinID:
XP_047403069
LinkDB
All DBs
Position
1:188345525..188371209
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AA seq
501 aa
AA seq
DB search
MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
CGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDL
KDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSR
RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRS
RSKKEKSRSPSKDDKSRSRSRSADKSRSKSKDHAEDKVQNNDSAGKPKSRSPSRHKSKSK
SRSRSQEHRVEEGKRGSRSRSKEKSRSQEKSLLKSRSHSRSRSKGGSRSRSRSKSKDKRK
GRKRSREESRSRSRSRSRSKSERSRKRSSKRDSKAGSSSKKKKKEDDRSQSRSPSRSASK
EREHAKAESAQREGRGESEGAAPNPETRSRSRSNSKSKPNPPSESRSRSKSASKTRSRSK
SRSRSASRSRSRSRSRSHSRS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtgtacatcggccgcctgagctaccaggcccgggagcgcgatgtggagcgc
ttctttaagggctacgggaagatcctggaggtggatctgaagaacggatacggttttgtg
gagtttgatgatctgcgtgatgcagatgatgctgtttatgaactgaatggcaaagacctt
tgtggtgagcgagtaattgttgagcatgcccgcggcccccggcgagacggcagttacggt
tctggacgcagtggatatgggtatagaagaagtggccgagataaatatggccctcctacc
cgcacagagtacagactaattgtggagaatttgtcaagtcggtgcagctggcaagaccta
aaggattatatgcgtcaagcaggagaagtgacctatgcagatgctcacaagggtcgcaaa
aatgaaggggtgattgaatttgtatcttattctgatatgaaaagagctttggaaaagttg
gatggaactgaagtcaatggcaggaaaatcagattagttgaagacaagccaggttctaga
cggcgccgatcctactccaggagccggagccactccaggtctcgctctcgaagcagacat
tcccggaagagcagaagccgaagtggcagtagcaaaagcagtcattctaagagtcggtcc
cggtccaggtccggctcccattctcggagcaagagccgcagccgcagccagagccgcagc
cgcagcaagaaggagaaaagcaggagccccagcaaggatgacaagagccgcagccgcagc
cgcagcgctgacaagagccgcagcaagagtaaagaccacgcggaggacaaagtccagaac
aacgacagcgctgggaagcccaagagccgcagccccagccggcataaaagtaagagtaaa
agtcggagcagaagccaggagcacagagtagaggaggggaagcgtgggagcaggagccgg
agcaaggagaagagccggagtcaggagaagagcctcctcaagagcaggagccacagcagg
agcaggagcaaagggggcagccgcagccgcagccgcagcaaaagcaaagacaagaggaag
ggccggaaaagaagcagggaggagagccgcagccggagccgcagccgcagccgcagcaag
agcgagcggagcaggaagcgcagcagcaagcgagacagcaaggcgggcagcagcagcaag
aagaagaagaaggaggatgaccgttcacagtccaggtcgccgtcccgctctgcgtccaag
gagcgggaacatgccaaggccgagtctgcccagagggaaggcagaggcgagagtgagggc
gccgctcccaatcccgagacccgctccaggtcgagatccaattccaaatcaaaaccaaac
cctccatcagaatcacgctccagatcaaagtcagcttcaaaaacccggtctcggtccaag
tctcgatccaggtctgcttccaggtcgcgctcccggtctcgatctaggtcccactcgagg
tcctaa
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