Sciurus carolinensis (gray squirrel): 124981006
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Entry
124981006 CDS
T08117
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncar00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ncar01100
Metabolic pathways
Module
ncar_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124981006
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
124981006
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124981006
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
124981006
Glycosyltransferases [BR:
ncar01003
]
O-Glycan biosynthesis
Glycosaminoglycan
124981006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
124981006
NCBI-ProteinID:
XP_047403111
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All DBs
Position
3:26088435..26101262
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AA seq
864 aa
AA seq
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MVASARVQKLVRRYKLAIATALAILLLQGLVVWSFSGLEEDEPSEKGRQRKPRPLDPGEG
SKDTDSSAGRRGSAGRRHGRWRGRAESPGLPVAKVVRAVTSRHRASRRVPPAPPPEAPGR
QNLSGAAAGEALVGAAGFPPHGDTGSVEGAPQPTDNGFTPKCEIVGKDALSALARASTKQ
CQQEIANVVCLHQAGSLMPKAVPRHCQLAGKMNPGIQWEEIRALPVDGPPVRIAYMLVVH
GRAIRQLKRLLKAVYHEQHFFYIHVDKRSNYLHREVVELAQRYENVRVTPWRMVTIWGGA
SLLRMYLRSMRDLLEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRDKNFLKSHGRDN
SRFIKKQGLDRLFHECDSHMWRLGERQIPSGIVVDGGSDWFVLTRSFVEYVAYTDDPLVA
QLRQFYTYTLLPAESFFHTVLENSPACESLVDNNLRVTNWNRKLGCKCQYKHIVDWCGCS
PNDFKPQDFLRLQQVSRPTFFARKFESTVNQEVLEILDFHLYGSYPPGTPALKAYWENTY
DVADGPGGLSDVMLTAYTAFTRLGLRHAATAAPPPATSLCKFEPRGLPSSVHLYFYDDHF
QGYLVTQAVQPSAQGPAETLEMWLMPQGSLKLLGRSDQASRLQSLEVGTEWDPKERLFRN
FGGLLGPLDEPVAMQRWARGPNLTATVVWIDPTYIVATSYDITVDAETEVTQYKPPLSRP
LRPGAWTIRLLQFWEPLGETHFLVLPLTFNRKLPLRKDDALWLHAGPPHNEYLEQSFQGL
SGILNLPQPEPMEEAARRRTELTGPALEAWTDGELSRFWSVAGLCAMGPSACPSLEPCRL
TSWSSLSPDPKSELGPVKSDGRLR
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgagcgcgcgggtgcagaagctggtgcggcgctacaagctggcgatcgccacc
gcgctggccatcctgctgctgcagggcctggtagtgtggagcttcagcggcctggaggag
gacgagccaagcgagaaaggaaggcagaggaagccacgaccattggaccctggcgagggc
tccaaggatacagacagctcagcagggcgaaggggcagcgcaggcagaaggcatgggcgc
tggcggggccgtgccgagagcccaggcttgcccgtggccaaggtggtacgggcagtaacc
agccgtcacagagccagtcggcgggtcccccctgccccacccccagaggctccaggtcgc
cagaacctgagcggggcagcagctggggaggcactggtaggggctgctggcttcccacca
catggagacacaggaagcgtggagggtgctccccagcccacagacaatggctttacccct
aagtgcgagatcgtgggcaaggatgcactgtctgctctggcccgggccagcaccaagcag
tgtcaacaggagatcgccaacgtggtatgcctgcaccaggctgggagcctcatgcccaag
gctgtgccacggcattgccagctggctgggaagatgaatcctggtatccagtgggaagag
attcgggccctgcctgtggatggccccccagtacgcatcgcctacatgttggtggttcat
ggccgcgccatccgccagctgaagcgtctcctcaaggccgtctaccatgagcagcacttc
ttttatatccatgtggacaagcgttccaactacctgcaccgggaggtggtggagctggcc
cagcggtatgaaaatgtacgggtgacaccctggcgcatggtcaccatctggggtggggcc
agccttctgaggatgtacctgcggagcatgcgggacctgctagaggtacctggttgggcc
tgggacttcttcatcaacctcagcgccactgactacccaaccaggaccaatgaggagctg
gtggcattcctatccaagaaccgggacaagaatttcctcaagtcacatggccgggacaac
tccaggttcatcaagaaacagggcctggaccggctcttccatgagtgtgactcgcacatg
tggcgcctgggtgagcggcagatcccttcaggcattgtggtggatggtggctccgactgg
tttgtgctgacacgcagctttgtggaatatgtggcgtacacggatgatccacttgtggcc
cagctacgccagttctacacgtacacgctgcttccagctgagtccttcttccacacggtg
ctggagaacagcccagcctgtgagagcctcgtggacaacaacctgcgggtcaccaactgg
aaccgcaagctgggctgcaagtgccagtacaagcacatcgtggactggtgtggctgctcc
cccaatgacttcaagcctcaggacttcctacggctgcagcaagtctccagacccactttc
ttcgcccggaagtttgagtcaactgtgaaccaggaggtcctggaaatcttggacttccac
ctgtatggcagctacccccctggcacaccagccctcaaggcctactgggagaacacctat
gacgtggccgatggccctggcggactcagtgatgtcatgctcaccgcttacaccgccttt
acccgccttggcctgcgccatgctgccactgccgcacccccaccggccacctcactctgc
aagtttgagcccaggggtttgccgtccagcgtgcacctgtatttctatgacgaccatttc
cagggctacctggtgacgcaggcggtgcagccctcagcccaagggccggcagagacgctt
gagatgtggctgatgccccaggggtcgctgaagctgttggggcgcagtgaccaggccagc
cggctccagagtttggaggttggcactgagtgggatcccaaagagcgtcttttccggaat
tttggggggttgctgggaccactggatgagcctgtggccatgcagcgctgggcccggggc
cccaacctcacagccactgtggtctggatcgacccaacctatatagtggcaacatcgtat
gatatcacggtagatgcggagactgaggtcacacaatacaagcctccactgagccggccc
ctacggccaggagcctggaccattcgactacttcagttctgggaacctctgggtgagacc
cacttcctcgtgctgcccttgaccttcaaccgcaaactacctctcaggaaagatgatgcc
ctctggctgcatgcaggaccaccccacaatgaatacttggagcagagtttccagggcctg
agcggcatcctgaacctgcctcagccagagcccatggaggaggccgcccggcggcgcaca
gagcttacaggtcctgctctggaggcctggacagatggggaactgagccgcttctggtct
gtggcaggactgtgtgccatgggcccctctgcctgcccctccctggagccctgcagactg
accagctggagttctctgtccccggaccccaaatcagagctggggcctgtcaaatcagac
gggcgactcaggtag
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