KEGG   Sciurus carolinensis (gray squirrel): 124981113
Entry
124981113         CDS       T08117                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03266  Virion - Herpesvirus
ncar04015  Rap1 signaling pathway
ncar04081  Hormone signaling
ncar04145  Phagocytosis
ncar04148  Efferocytosis
ncar04151  PI3K-Akt signaling pathway
ncar04380  Osteoclast differentiation
ncar04510  Focal adhesion
ncar04512  ECM-receptor interaction
ncar04517  IgSF CAM signaling
ncar04518  Integrin signaling
ncar04611  Platelet activation
ncar04613  Neutrophil extracellular trap formation
ncar04640  Hematopoietic cell lineage
ncar04810  Regulation of actin cytoskeleton
ncar04820  Cytoskeleton in muscle cells
ncar04919  Thyroid hormone signaling pathway
ncar05163  Human cytomegalovirus infection
ncar05165  Human papillomavirus infection
ncar05168  Herpes simplex virus 1 infection
ncar05205  Proteoglycans in cancer
ncar05206  MicroRNAs in cancer
ncar05410  Hypertrophic cardiomyopathy
ncar05412  Arrhythmogenic right ventricular cardiomyopathy
ncar05414  Dilated cardiomyopathy
ncar05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    124981113
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    124981113
   04151 PI3K-Akt signaling pathway
    124981113
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    124981113
   04512 ECM-receptor interaction
    124981113
   04517 IgSF CAM signaling
    124981113
   04518 Integrin signaling
    124981113
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    124981113
   04148 Efferocytosis
    124981113
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124981113
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124981113
   04810 Regulation of actin cytoskeleton
    124981113
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    124981113
   04611 Platelet activation
    124981113
   04613 Neutrophil extracellular trap formation
    124981113
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    124981113
  09158 Development and regeneration
   04380 Osteoclast differentiation
    124981113
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    124981113
   05205 Proteoglycans in cancer
    124981113
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124981113
   05163 Human cytomegalovirus infection
    124981113
   05165 Human papillomavirus infection
    124981113
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    124981113
   05410 Hypertrophic cardiomyopathy
    124981113
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124981113
   05414 Dilated cardiomyopathy
    124981113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124981113
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124981113
   04515 Cell adhesion molecules [BR:ncar04515]
    124981113
   04090 CD molecules [BR:ncar04090]
    124981113
Membrane trafficking [BR:ncar04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    124981113
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124981113
Cell adhesion molecules [BR:ncar04515]
 Integrins
  Integrin beta subunits
   124981113
CD molecules [BR:ncar04090]
 Proteins
  124981113
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin I-EGF_1 PSI_integrin EGF_2 EGF_Teneurin vWA_SIBA-E BLOC1S3
Other DBs
NCBI-GeneID: 124981113
NCBI-ProteinID: XP_047403243
LinkDB
Position
3:complement(16642606..16696500)
AA seq 792 aa
MRARRGPWPWPLWAALLALGALAGVGAGVGGPNICTTRGVSSCQQCLAVSPVCAWCSDEA
LPLGSPRCDLKENLLKDNCALESIEFPVSEAQILEARPLSDKGSGDGSQVTQVSPQRIAL
RLRPDDSKKFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLASQMRKLTSNLR
IGFGAFVDKPVSPYMYISPPEALKNPCYDMKNACLPMFGYKHVLTLTDQVTRFNEEVKKQ
SVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPND
GQCHVGPDNRYSASTTMDYPSLGLMTEKLSEKNINLIFAVTENVVNLYQNYSELIPGTTV
GVLSTDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCVGLK
IGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLTVQVTFDCDCTCQAHAEPYSRRCND
GNGTFECGVCRCGPGWLGSHCECSEEDYRPSQQDECSPKEGQPVCSQRGECLCGQCVCHS
SDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSS
NGLLCSGRGKCECGSCICIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGVLHEENT
CTRYCRDEIESVKELKDTGKDAVNCTYKNEEDCVVRFQYYEDASGKSILYVVEEPECPKG
PDILVVLLSVMGAILLIGLATLLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEA
TSTFTNITYRGT
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgagagcgcggcgggggccttggccctggccgctctgggcagctctgctggcgctgggg
gcgctggcgggcgtcggcgcgggggtcggagggcccaatatctgtaccacaagaggggtg
agctcctgccagcaatgtctggctgtgagtcctgtgtgtgcctggtgctccgatgaggcc
ctgcctctgggctcaccccgctgtgacctgaaggagaatctgctgaaggataactgtgcc
ctagagtccatcgagtttcccgtcagtgaggcccaaatcctggaggccagacctcttagt
gacaagggttccggagatggctcccaggttactcaagtcagtccccagaggattgctctc
cggctacggccagatgactcgaagaagttctccatccaagtgcggcaggtggaggattac
cctgtagacatctattacctaatggacctgtcttactccatgaaggatgatctgtggagc
atccagaacctgggtaccaagctggcctcccaaatgcgcaagctcaccagtaacctgcgg
attggctttggggcctttgtggacaagcctgtgtcaccatacatgtacatctccccacca
gaggcactcaaaaatccctgttatgatatgaagaatgcctgtttgcctatgtttggctac
aaacacgtgctgacactgacagaccaggtgactcgcttcaatgaggaagtgaagaagcag
agtgtgtcacggaaccgggatgccccagagggtggctttgatgccatcatgcaggctaca
gtttgtgatgaaaaaattggctggaggaatgatgcatctcatttactggtttttaccact
gatgccaagacccatatagcattggatggaagactggcaggcattgtccagcccaatgat
gggcaatgtcatgttggccctgacaaccgttactctgcctccactaccatggattatccc
tctctgggactgatgactgagaaactatctgagaaaaatatcaatttgatttttgcagtg
actgaaaatgtagtcaatctctaccagaactacagtgagctcatcccagggaccacagtg
ggggttctgtccactgattccagcaatgtcctccagctcattgttgatgcttacgggaaa
atacgctctaaagtagagctggaagtgcgagacctccctgaggaattgtctctgtccttc
aatgccacctgcctcaataatgaggtcatcccaggcctcaagtcttgtgtgggactcaag
attggagatacggtgagcttcagcattgaggccaaggtgcgcggctgcccccaggaaaag
gagaagtcctttaccataaagcctgtgggcttcaaggacagcctcactgtccaggtcacc
ttcgactgcgactgcacctgccaggcccacgccgagccttacagccgccgctgcaacgat
ggcaatgggaccttcgagtgtggggtgtgccgctgtgggcccggttggctcgggtcccac
tgcgagtgctcagaagaggactaccgcccgtctcagcaggatgagtgcagccccaaggag
ggccagcccgtctgcagccagaggggcgagtgcctctgtggccagtgcgtctgccacagc
agtgactttggcaagatcaccggcaaatactgcgaatgcgacgatttctcctgtgtccgc
tacaagggggagatgtgctcagggcatggccagtgcagctgtggggactgcctgtgtgac
tccgactggactggctactactgcaactgcaccacacgcaccgacacctgcatgtccagc
aatgggctgctgtgtagcggccggggcaagtgtgaatgtggcagctgcatctgcatccag
ccaggctcctatggggacacttgtgagaaatgtcccacttgcccggatgcctgcaccttt
aagaaggagtgtgtggagtgtaagaagtttgaccggggagtccttcatgaggaaaacacc
tgtacccgttactgccgtgacgagatcgagtctgtgaaagagcttaaggacactggcaag
gatgcagtgaactgcacctacaagaatgaggaggactgcgttgtcagattccagtactat
gaagatgctagtgggaagtccatcctgtatgtggtggaagagccagagtgtcccaagggt
cctgacatccttgtggtcctgctctcagtgatgggggctattctgctcatcggcctcgca
actctgctcatctggaagctcctcatcaccatccatgaccggaaagagtttgctaaattt
gaggaagaacgagccagagcaaaatgggacacagccaacaacccgctgtataaagaggcc
acgtccaccttcaccaatatcacctaccggggcacttaa

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