Sciurus carolinensis (gray squirrel): 124981349
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Entry
124981349 CDS
T08117
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124981349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124981349
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124981349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
124981349
NCBI-ProteinID:
XP_047403606
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Position
3:complement(66317846..66349429)
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AA seq
597 aa
AA seq
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MAEIIQERIEDRIPELEQLERVGLFSRAEIKAIIKKASDLEYKIQRRSLFKEDFINYVQY
EINLLELIQRRRTRIKYSFKKDEIEHSIVHRVQGIFRRASAKWKDDVQLWLSYVVFCKKW
ATKAQLSKVYSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYQ
EYFRMELMHAEKLQKEKQEFEKADMDMGNFDHPEEILNGELARIVYKNSISKIKGAEFHV
SLLSIAQLFDFAKDLQKEIYDDLQAMHTDDPLTWDYVARRELEIQSQPGDEQPLTKQARA
VEVGQREERCCAVYEEAVKTLPTEGMWKCYINFCLERFSKKTSSAFLRGKRLERTMIPFR
KAHELKLLSESQCKQWIELLLHRDFFTEALEVAEAGIELFKDSVTMWQMKLQVLIASKSP
DITMFVEEAFVHLKPQVCLPLWISWAEWSEGAQSHEDTEAIFKKAILAITGTSSVTLKDK
YLDWAYRSGGNKKARTVFKSLQESRPFSVDFFRKMIQFEKEQESCKMTNLREYYERALRE
FGSVDSDLWMDYIKEELSHPLGRPENCGQIYWRAMKMLQGESAELFVAKHAMHQAGH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggagataatccaggaacgcatagaagatcgaatccccgaattggaacagctggag
cgcgttggactgttcagtcgtgcggagattaaggctatcattaagaaggcttctgatcta
gaatacaaaatacaaagaagatctctttttaaggaagactttatcaattatgttcaatat
gaaattaatcttttggaacttatccagagaagaagaacacgcattaaatattcatttaag
aaggatgagattgagcattctattgtgcaccgggtacaaggtatcttccgacgtgcttca
gcaaagtggaaagatgatgttcaactttggctatcctatgttgttttttgtaagaaatgg
gctaccaaagctcaacttagcaaggtatactctgccatgttagctattcattcaaataag
ccagctttgtggattatggcggccaaatgggaaatggaagatcgcttatcttctgaaagt
gcaaggcagctgtttcttcgggctctgcgctttcatccagagtgtccaaaactctatcag
gaatacttcaggatggagctaatgcatgctgagaaactgcagaaggaaaaacaagaattt
gaaaaggccgatatggatatggggaattttgatcatcctgaagaaatccttaatggcgag
ttggcacgcatcgtctacaaaaattctataagcaagattaaaggtgctgaatttcatgta
tcacttctttcaattgcacaactgtttgattttgccaaagatctacaaaaagagatttat
gatgaccttcaggctatgcacacagatgaccctctcacttgggattatgtggcacggcga
gaattagagatccagtctcaaccaggagatgagcagcctttgacgaaacaagccagagca
gtggaggtgggccagagggaggagaggtgctgtgctgtatatgaagaggcggtgaagact
ctgcctacagagggcatgtggaagtgttatatcaacttttgcttggaaaggttttctaag
aagacgagtagtgcgttcctcagagggaagagactggagagaactatgattccattcagg
aaggcacatgaactcaagctcctttcagaatcccaatgcaagcagtggattgagttgttg
ttgcaccgtgacttctttacggaagctctggaggtagcagaagctgggattgaattgttc
aaggactctgtgacaatgtggcagatgaagctgcaggtgctgattgcctcaaagagccct
gacataaccatgtttgttgaagaagcctttgtgcacctaaaaccccaggtttgtctgccc
ttgtggatttcttgggcagagtggagtgaaggtgcccaaagccatgaagacacagaagca
atctttaagaaagctatattagctatcacaggtaccagctcagtaactctgaaggataaa
tacctggattgggcttatcgaagtggtggcaacaaaaaggccagaactgtgtttaaaagt
ttacaggaaagccggccattttcagtagattttttcaggaaaatgatccagtttgaaaag
gagcaagaatcctgcaagatgacaaacttaagagaatattatgagagagctttgagagag
tttggatctgtagattctgatctttggatggactacatcaaagaagaattgagccatcca
cttggtagacctgagaattgtggacaaatctattggcgagccatgaagatgttgcaggga
gagtcagcagagttgtttgtagccaaacatgctatgcatcaggctggccattag
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