Sciurus carolinensis (gray squirrel): 124981395
Help
Entry
124981395 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF135-like
KO
K16272
E3 ubiquitin-protein ligase RNF135 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124981395
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124981395
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124981395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
Phage_TAC_2
zf-4CXXC_R1
zf-RING_10
zf-RING_6
TRAF3_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
124981395
NCBI-ProteinID:
XP_047403707
LinkDB
All DBs
Position
3:66592005..66603584
Genome browser
AA seq
428 aa
AA seq
DB search
MAGLGSSVAIPVWLTEEDLSCIICHGLLTSPVTLHCGHSFCCNCLRKAWGARGTGVAGHL
WACPTCREGAARQPPLRKNTLLQYLADRYSRALSELEAGSERVPSPATAQAAGTQHRPAP
PRVAVPENITEVVQELTELVGQLVDIVKSLQRQTPLSESEQDNEVNIGSMALSSGEDCDL
TSPSLVTSNTSEGRMREILQDLEEIQKNLQENFTWKAAPEEQTQVELPEALSSSTLPDQS
CPEPRRASRFAQWISNPTFDLGSLSCSLTVSEDCRTVTVSRFRQPYHWSQERFSTSQVLC
SQAFSSGRHYWEVDTKYCNHWAVGVASWGMSRDRMLGRTMDSWCIEWKGTGQLSAWTMVK
ETVLNSDRPGVVGICLDLEEGWLAFYSVASQETLLYECEIAASSPLHPAFWLYGLTPGNS
LIINQVKV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctgggctccagtgtggccatccccgtgtggctgaccgaggaggacctgagc
tgcatcatctgccacgggctgctgacctctcccgtcacgctgcactgcggccacagcttc
tgctgcaactgcttaaggaaagcgtggggcgcgcggggcacgggggtcgcgggccaccta
tgggcctgccccacctgccgagagggcgcggcgcggcagccgccgcttcgaaagaacacg
ctgctgcagtacctggccgaccggtacagccgggcgctgagcgagctagaggccggctcc
gagcgggtcccgagcccggccacggctcaggccgcgggcacccagcaccgcccggcgccg
ccgcgggtggcagtaccagaaaacatcacagaagttgtccaggagctgacagagctggtg
ggacagcttgtggacattgtcaagagccttcagaggcagacacccctctcagaatctgaa
caagacaatgaagtaaacatcgggagcatggccttgtcatctggagaggactgtgacttg
acttctccaagcctagtgacttccaacacatctgaggggagaatgcgagagattctccag
gatctagaagaaattcagaaaaacttacaagaaaacttcacatggaaagcagctcctgaa
gagcagacacaggtggaactcccagaagctctgtcttcctctacattgcctgatcagagc
tgcccggaacctaggagggcctctcgttttgctcagtggatcagcaatccaacctttgac
ttgggaagcctctcctgtagcctgaccgtatctgaggattgccggacagtaactgtgtct
cgattccggcagccctatcactggagtcaagagaggttttcaaccagtcaggtcttatgt
tcccaggccttctcttctgggcggcactactgggaagtggacacaaagtactgcaatcac
tgggcagttggagtggcttcttggggcatgagcagagaccggatgctgggacggactatg
gactcttggtgtatagagtggaagggaactggccagctgtctgcatggaccatggtcaaa
gaaactgtactcaactcagacagacctggggtggtgggcatctgcctggacctggaggag
gggtggcttgccttctattcagtggccagtcaggagacgcttctatatgagtgtgagatt
gctgcctcctctcccctgcaccctgccttctggctgtacggcctaactcctggaaactcc
ctgatcataaatcaagtaaaagtataa
DBGET
integrated database retrieval system
