Sciurus carolinensis (gray squirrel): 124981414
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Entry
124981414 CDS
T08117
Name
(RefSeq) dynein axonemal intermediate chain 2 isoform X1
KO
K11143
dynein axonemal intermediate chain 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04814
Motor proteins
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124981414
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124981414
05016 Huntington disease
124981414
05022 Pathways of neurodegeneration - multiple diseases
124981414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124981414
04812 Cytoskeleton proteins [BR:
ncar04812
]
124981414
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Dynein arm
124981414
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124981414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNAI3_WD
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
DSE1_N
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
124981414
NCBI-ProteinID:
XP_047403736
LinkDB
All DBs
Position
3:complement(6605358..6632105)
Genome browser
AA seq
602 aa
AA seq
DB search
MEIVYVYVKKRSEFGKQCNFSDRQAELNIDISPNPELALQFVERNPVDTGIQCSTSMSEH
EANTERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYINAIMQLGSIMEHC
IKQNNAIDIYQEYFDDEEEVEVTEEAPSAKTINVFRDPQDIKRTATHVSWHPDGNRKLAV
AYSCLNFQRAPAGMSHESYIWELENPNRPEIALKPPSPLVTLEYNPKDSHVLLGGCYNGQ
IACWDTRKGSLVAELSTIEFSHRDPVYGSIWLQSKTGTECFSASTDGQVMWWDIRKISEP
TEVVVMDISRKELLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTPAEKIVCTF
SGHHGPIYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKYHMAYLTDGAWSPIRP
AVFFTTKMDGTLDIWDFVFKQCDPALSLKVCDEALCCLRVQDTGCLIACGSQLGTTTLLE
VSSGLSTLQRNERNIASSIFERETRREKILEARHREMRLKEKGKAEGKDEDQREEELVVD
LEGLVAKAEEEFFSVIFQELKKKEAEAMEKKPKQQRKSSDVYDVEEREGGSEEEVEGEEV
PT
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtctacgtgtacgtgaagaagcgcagcgagtttggcaagcagtgcaacttc
tcagaccgccaggccgagctgaacatcgacatttcccccaaccccgagctggccttgcag
ttcgtggagcggaacccagtggacaccggcatccagtgctccaccagcatgtcggagcat
gaggcgaacacggagcggtttgagatggagacccgaggggttaaccacgtagagggcggc
tggcccaaggacgtgaatcccctggagctggagcagacaatccgcttccggaaaaaagta
gagaaggacgagaactacattaatgctatcatgcagcttggctcgatcatggagcattgc
atcaagcagaacaatgccatcgatatctaccaggagtatttcgatgacgaggaagaggtg
gaggtgaccgaagaggccccttcggctaaaaccattaatgtcttcagggacccacaggac
atcaagcggacggccacacacgtctcctggcaccccgatggcaaccggaagttggcagtg
gcctattcttgcctgaattttcagcgggcgcctgcaggcatgagccacgagtcatacatc
tgggaactggaaaaccccaacaggcctgaaatcgccctgaagcctccttccccgctggtc
accttggagtacaaccccaaagattcccacgtgctcctgggcggctgctacaatggccag
atagcctgctgggacacgcggaagggcagcctggtggcagagctgtccaccatcgagttc
agccaccgcgaccctgtgtatggctccatctggctgcagtcgaagacgggcactgagtgc
ttttcagcatccacggatggacaggtcatgtggtgggacatccgcaagatcagcgagccc
accgaggtggtggtcatggacatcagcaggaaggagctcctggaaaacgccctgggtgcc
atctccctggagttcgagtcgactttgccaaccaagttcatggtgggcactgagcagggt
atagtcatctcctgcaaccgcaaggccaagaccccagcggagaagatcgtgtgtaccttc
tcaggccaccatggccccatctacgccctccagagaaaccccttctacccaaagaacttc
ctgaccgtaggggactggacagcccgcatctggtcagaggacagccgggagtcgtccatc
atgtggaccaagtaccacatggcttacctcacggatggcgcctggagccccatcaggccg
gctgtgttcttcaccaccaagatggacggaaccctggacatctgggactttgtgttcaag
cagtgtgaccccgccctcagcctgaaggtctgtgacgaggccctctgctgcctccgggtg
caggacactggatgtctcattgcctgtggctcccagctggggaccaccaccctgctagaa
gtctccagcgggctctccaccctccagaggaacgagaggaacatagcttcttccatattt
gagcgggagacccggcgggagaagatcctggaggccaggcaccgagagatgcgactgaag
gagaagggcaaggcagagggcaaagacgaggaccagcgggaggaggagctggtggtggac
ctggagggtctggtcgccaaggccgaggaggagttcttcagcgtcatcttccaggaactc
aagaagaaggaggcggaggccatggagaagaagccaaagcagcagaggaaaagttccgac
gtgtacgatgtggaggagagagagggcggctcggaggaagaggtggaaggagaggaagtg
ccgacctag
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