Sciurus carolinensis (gray squirrel): 124981428
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Entry
124981428 CDS
T08117
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 24 isoform X1
KO
K15167
mediator of RNA polymerase II transcription subunit 24
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
124981428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124981428
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
124981428
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Ortholog
Paralog
GFIT
Motif
Pfam:
Med24_N
Motif
Other DBs
NCBI-GeneID:
124981428
NCBI-ProteinID:
XP_047403758
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All DBs
Position
3:22367679..22404093
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AA seq
1060 aa
AA seq
DB search
MSLCLVGFCLPLSSSETLCPPGPINKHLISSLGPLLSPQSWLPSALAPQTKVMKVVNLKQ
AILQAWKERWSDYQWAINMKKFFPKGATWDILNLAEALLEQAMIGPSPNPLILSYLKYAI
SSQMVSYSSVLTAISKFDDFSRDLCVQALLDIMDMFCDRLSCHGKAEECIGLCRALLSAL
HWLLRCTAASAERLQEGVEAGPPATGEKQLAMCLQRLENTLSSTKNRALLHIAKLEEASL
HTSQGLGQGGIRANQPTASWTAIEHSLLKLGEILANLSNPQLRSQAEQCGTLIRSIPTML
SVHSEQLHKTGFPTVHAVVLLEGTMNLTGETQPLVEQLMMVKRMQHIPTPLFVLEIWKAC
FVGLIESPEGTEELKWTAFTYLKIPQVLVKLKKYCHGDKDFTEDVNCAFEFLLKLTPLLD
KADQRCNCDCTNFLLQECNKQGLLSETNFANLVAKRSADREHAPQQKSSENANIQPNPGL
ILRAEPTVTNILKTMDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFI
NLNEFTTHGSGESTKTASVRALLFDISFLMLCHVAQTYGSEVILSESSTGAEVPFFETWM
QTCMPEEGKILNPDHPCFRPDSTKVESLVALLNNSSEMKLVQMKWHEACLSISAAILEIL
NAWENGVLAFESIQKITDNIKGKVCSLAVCAVAWLVAHVRMLGLDEREKSLQMIRQLAGP
LYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLLPPKRPIKE
VLTDIFAKVLEKGWVDSRSIHIFDTLLHMGGVYWFCNNLIKELLKETRKEHTLRAVELLY
SIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSYSSHKGQAS
SRQKKRHREDIEDYISLFPLDDMQPSKLMRLLSSNEDDANILSSPTDRSMNSSLSASQLH
TVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVDCLEQGSRGSILQFMPF
TTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctgcctggttggcttctgcctacccctgtcctccagcgagaccctttgccca
cctggaccaatcaataagcacctcatctcttctctgggtccattgctgtcacctcaaagc
tggctaccgtcggccttggctcctcagactaaagtcatgaaggtggtgaacctgaagcaa
gccattttgcaagcctggaaggagcgatggagtgactatcaatgggcaatcaacatgaag
aagttctttcccaaaggggccacctgggacattctcaacctggcagaagcacttctggag
caggccatgattggaccttcccccaatcctctcatcctgtcttacctgaagtatgccatt
agttcccagatggtgtcctactcttctgttctcacagctatcagtaagtttgatgacttt
tcccgagatctgtgtgttcaggctttgctggatatcatggacatgttttgtgaccgactg
agctgtcacggcaaagcagaggagtgcatcgggctgtgccgagcccttctcagcgccctc
cactggctgctgcgctgcaccgcggcctctgcagagcggctccaggaaggagtggaggcc
ggtcctccagccactggggagaagcagcttgccatgtgcctgcagcgcttggagaatact
ctcagcagcaccaagaatcgggccctgctgcacatcgccaaactagaggaggcctcattg
catacatcccagggacttgggcagggtggcatccgagccaatcaaccaacagcctcctgg
actgccattgaacattctctcttgaagcttggggagatcctggccaatctcagcaacccc
cagctccggagccaggctgaacagtgtggcacactcattaggagcatccccaccatgctg
tctgtgcactcagaacagctgcacaagactggctttcccactgtgcatgcggtggtcttg
ctcgagggcaccatgaacctgactggtgagacgcagcccctggtggagcagctgatgatg
gtgaagcgcatgcagcatattcccaccccactttttgtcctggagatctggaaagcctgc
tttgtgggacttattgagtctcctgagggcacggaggagctcaagtggacagctttcacc
tacctcaagattccacaggttttggtgaagttgaagaaatactgtcatggggacaaggac
tttactgaggatgtcaactgtgcttttgagttcctgctgaagctcactcccttgttggac
aaagctgaccagcgctgcaactgtgactgtacaaacttcctcctccaagaatgcaataag
cagggccttctgtctgaaaccaatttcgccaaccttgtggccaagcgctcagcagatcgg
gagcatgcaccccagcagaagtcatcagaaaatgccaacatccaaccgaatcctgggctc
atcctccgagcagaacccactgtcacaaacattctcaagacgatggatgcagaccattcc
aagtccccagagggactgctgggggtcctgggacacatgctgtctggaaagagcctggac
ttgttgctggctgctgctgctgccactgggaagcttaaatcctttgcccggaaattcatc
aatttgaatgagttcaccactcatggcagtggagagagcaccaaaacagcctcagttcgt
gccttgctctttgatatctccttcctcatgctgtgccatgtggcccagacctatggctca
gaggtgattctgtcagagtcgagcacaggagcagaggtacccttctttgagacctggatg
cagacctgcatgcctgaggagggcaagatcctgaaccctgaccacccctgcttccggcct
gactccaccaaagtggaatccttggtggccctgctcaacaactcctcagagatgaagctg
gtgcagatgaaatggcatgaagcctgtctcagcatttcagctgccatcttggaaatcctc
aatgcctgggagaatggggtactggccttcgagtccatccagaaaatcactgataatatc
aagggaaaggtatgcagtctggctgtgtgtgctgtggcttggcttgtggcccacgtccgg
atgctggggctggatgagcgtgagaagtcactgcagatgatccgccagctggcaggacca
ttgtatagtgagaacaccctgcagttctacaatgagagggtggtgattatgaactcaatc
ctggagcacatgtgtgcagatgtgctacagcagacagccactcagatcaagttcccatcc
acgggggtagacacaatgccctactggaacctgctgccccccaagcggcctatcaaggag
gtgttgacagacatctttgccaaggtgctggaaaagggctgggtggacagccgctctatc
cacatctttgacaccctgctgcacatgggaggtgtctactggttctgcaacaacctgatt
aaggagctgttgaaggagacgcggaaggagcacacgctgcgggcagtggagctcctctac
tccatcttttgtctggacatgcagcaagtgaccctggtcctgctgggccacattctgcct
ggcttgctcaccgactcctctaagtggcacagcctcatggacccccccggcactgcactg
gccaaactagctgtatggtgtgccctgagttcctactcttcccacaagggacaggcgtcc
tcccggcaaaagaagagacacagggaagacattgaggattacatcagcctctttcccttg
gacgacatgcagccatcaaagctgatgcgactgctgagctccaatgaggacgacgccaac
atcctctcgagtcccactgaccggtccatgaatagctccctctcggcctctcagctccac
acagtcaacatgcgggaccctctgaaccgagtcctggccaacctgtttctgctcatttcc
tccatcctgggttcgcgcaccgctggcccccacacccagttcgtgcagtggttcatggag
gagtgtgtggactgcctggagcaaggcagtcgaggcagcatcctgcagttcatgcccttc
accaccgtttcagaactggtgaaggtatcagccatgtccagccccaaggtggttctggcc
atcacagacctcagcctgcctctgggccgccaggtggctgccaaagccattgccgcactc
tga
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