KEGG   Sciurus carolinensis (gray squirrel): 124981909
Entry
124981909         CDS       T08117                                 
Name
(RefSeq) protein mago nashi homolog 2
  KO
K12877  protein mago nashi
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03013  Nucleocytoplasmic transport
ncar03015  mRNA surveillance pathway
ncar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124981909
  09122 Translation
   03013 Nucleocytoplasmic transport
    124981909
   03015 mRNA surveillance pathway
    124981909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124981909
   03041 Spliceosome [BR:ncar03041]
    124981909
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124981909
Spliceosome [BR:ncar03041]
 Complex C
  Other components
   EJC/TREX
    124981909
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 124981909
NCBI-ProteinID: XP_047403910
LinkDB
Position
4:complement(77477435..77485191)
AA seq 148 aa
MAMASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVME
ELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEG
LRVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 447 nt   +upstreamnt  +downstreamnt
atggctatggctagtgatttctacctgcgctactacgtagggcacaaggggaagtttgga
cacgagtttctagagttcgagtttcggccagacggaaagcttagatatgccaacaacagc
aattacaaaaatgatgttatgatcaggaaagaggcatatgtacataagagtgtaatggaa
gaactgaagagaattattgatgacagtgaaattacaaaagaagatgatgccctgtggcct
ccccctgacagggttgggcgacaggaacttgaaattgtaattggagatgaacacatttct
tttaccacatcaaaaataggttctcttattgatgtaaatcagtcaaaggatcctgaaggc
cttcgagtattttactatttggtacaggacttgaaatgtttagttttcagtctcattgga
ttacacttcaagattaaaccaatttaa

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