Sciurus carolinensis (gray squirrel): 124981926
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Entry
124981926 CDS
T08117
Name
(RefSeq) prelamin-A/C isoform X1
KO
K12641
lamin A/C
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04210
Apoptosis
ncar04820
Cytoskeleton in muscle cells
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124981926
09142 Cell motility
04820 Cytoskeleton in muscle cells
124981926
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124981926
05412 Arrhythmogenic right ventricular cardiomyopathy
124981926
05414 Dilated cardiomyopathy
124981926
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124981926
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
124981926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
TolA_bind_tri
HAUS-augmin3
ACBP4_C
FKBP15
CENP-F_leu_zip
CCDC39
Tht1
DUF4407
Motif
Other DBs
NCBI-GeneID:
124981926
NCBI-ProteinID:
XP_047403929
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All DBs
Position
1:complement(93981559..94002204)
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AA seq
664 aa
AA seq
DB search
METPSQRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLR
LRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKARN
TKKEGDLMAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAK
KQLQDEMLRRVDAENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESR
LADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRID
SLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQ
ELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRASSHSSQTQGGGSATKKRK
LESAESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLT
YRFPPKFTLKAGQVVTVWAAGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAM
RKLVRSVTVVDDDEDEDGDDLLHHHHGSHCSSSGDPAEYNLRSRTVLCGTCGQPADKASA
SGSGAQVGGSISSGSSASSVTVTRSYRSVGGSGGGSFGDSLVTRSYLLGNSSPRTQSAQN
CSIM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccgtcccagcggcgcgccacccgcagcggggcgcaagccagttccactccg
ctgtcgcccacccgtatcacccggctgcaggagaaggaggacctgcaggagctcaatgac
cggttggcggtctacatcgatcgtgtgcgctcgttggagaccgagaatgcagggctgcgc
ctccgcatcaccgagtctgaagaagtggtcagccgcgaggtgtccggcatcaaggccgcc
tatgaggccgagctgggggatgcccgcaagaccctcgactcggtggctaaggagcgcgcc
cgcctacagctggagctgagcaaagtgcgcgaggagtttaaggagctcaaagcgcgcaat
accaagaaggagggcgacttgatggccgcccaggcccggctcaaggacctggaagctctg
ctgaactccaaggaggccgcactgagcactgctctcagtgagaaacgcacattagagggc
gagctgcacgatcttcggggacaggtggccaagctcgaggcagctctgggtgaggccaaa
aagcaacttcaggatgagatgctgcggcgggtggatgctgagaacaggctgcagaccctg
aaggaggaactggacttccagaagaacatctacagtgaggagcttcgtgagaccaagcgc
cgccatgagacccggttggtggagattgacaatgggaagcagcgtgaattcgagagccga
ctggcagatgccctgcaggagctgcgagcccagcatgaggaccaggtggaacagtacaag
aaggagttggagaagacctattctgccaagctggataacgccaggcaatctgcggagagg
aacagcaacctggtgggggccgcccatgaggagctgcagcagtcccgcattcgcatcgac
agcctctcagcccagctcagccagctgcagaagcagctggcagccaaggaagcgaagctt
cgggacctggaggactcgctggcccgtgagcgtgacactagccggcggctgctggcagag
aaagaacgggagatggctgaaatgcgggcaaggatgcagcagcagctggatgagtaccag
gagctgctggacatcaagctggccctggacatggagatccacgcctaccgcaagctcttg
gagggcgaggaggagaggctacgcctgtcccccagccccacctcacagcgcagccgtggc
cgtgcctcctcccactcatcccagacacagggtgggggaagtgccactaaaaagcgcaag
ctggagtccgctgagagccgcagcagcttctcccagcatgctcgcaccagtggacgtgtg
gctgtggaggaggtggacgaggagggcaagtttgtgcggctgcgcaacaaatccaatgag
gaccagtccatgggcaattggcagatcaagcgccagaatggagatgaccccttgctgact
taccgcttcccaccgaagttcaccctgaaggctgggcaggtggtgacggtctgggctgca
ggagctggagccactcatagccctcctactgacttggtgtggaaagcgcagaacacctgg
ggctgtgggaatagcctgcgcacggctctcatcaactccaccggggaagaggtggctatg
cgcaagctggtgcgctcagtgacagtggttgatgacgatgaggatgaggatggagatgac
ctgctccatcaccaccacggctcccactgcagcagctcgggggaccccgctgagtacaac
ctgcgctcccgtacagtgctgtgtgggacatgtgggcagcctgccgacaaggcgtctgcc
agcggctcgggagcccaggtgggcggatccatctcctctggctcttctgcctccagtgtc
acagtcactcgcagctaccgcagtgtggggggcagtgggggtggcagcttcggggacagc
ctggtcacccgctcctacctcctgggcaactccagtccccggacccagagtgcccagaac
tgcagcatcatgtaa
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