Sciurus carolinensis (gray squirrel): 124981928
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Entry
124981928 CDS
T08117
Name
(RefSeq) peroxisome proliferator-activated receptor alpha isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03320
PPAR signaling pathway
ncar04024
cAMP signaling pathway
ncar04920
Adipocytokine signaling pathway
ncar04922
Glucagon signaling pathway
ncar04931
Insulin resistance
ncar04932
Non-alcoholic fatty liver disease
ncar04936
Alcoholic liver disease
ncar05160
Hepatitis C
ncar05207
Chemical carcinogenesis - receptor activation
ncar05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
124981928
09150 Organismal Systems
09152 Endocrine system
04922 Glucagon signaling pathway
124981928
04920 Adipocytokine signaling pathway
124981928
03320 PPAR signaling pathway
124981928
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
124981928
09172 Infectious disease: viral
05160 Hepatitis C
124981928
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
124981928
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
124981928
04932 Non-alcoholic fatty liver disease
124981928
04931 Insulin resistance
124981928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124981928
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncar03310
]
124981928
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124981928
Nuclear receptors [BR:
ncar03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
124981928
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124981928
NCBI-ProteinID:
XP_047403925
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Position
4:173362688..173426984
Genome browser
AA seq
487 aa
AA seq
DB search
MPPAKASLELSADQLQLVNMVDTESPICPLSPLEAGDLESPLSEEFLQEMGNIQDISQSI
GEDSSGSFTFTEYQYLGSGPGSDGSVVTDTLSPASSPSSVSYPVVPGSVDESPSGTLNIE
CRICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKC
LSVGMSHNAIRFGRMPRSEKAKLKAEILTCEHEAADSATADLRSLAKRIYEAYLRNFHMS
KVKARVILAGKTGHNPPFVIHDMETLCMAEKTLVAKMVANGIQNKEAEVRIFHCCQCMSV
ETVTELTEFAKAIPGFANLDLNDQVTLLKYGVYEAIFTMLSSLMNKDGMLVAYGNGFITR
EFLKNLRKPFCDIMEPKFDFAMKFNALELDDSDISLFVAAIICCGDRPGLLNIGYIEKMQ
EGIVHVLKLHLQSNHPDDTFLFPKLLQKMADLRQLVTEHAQLVQTIKKTESDAALHPLLQ
EIYRDMY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccgccagctaaagctagcttggagctgagcgctgaccagctccagctagtcaacatg
gtggacacggagagtcccatctgccccctctccccactggaggctggtgacctggaaagc
ccgctgtctgaagaattcctacaagaaatgggaaacattcaagacatatctcagtccatt
ggggaggacagttctggaagctttactttcacagaataccagtacttaggaagcgggccc
ggatcggatgggtctgtcgtcaccgacaccctctctccagcttccagtccctcttcggtt
agttaccctgtggttcctggcagcgtggatgaatctcccagtggtacactgaacattgag
tgtaggatctgtggggacaaggcctcaggctaccactatggggtccacgcctgtgaaggc
tgcaagggtttcttccggaggaccatccggctgaagctggtgtacgacaagtgtgaccgc
agctgcaagattcagaagaagaatcggaacaagtgccagtactgccgcttccacaagtgc
ctgtcggtcgggatgtcgcacaacgcaattcgttttggacgaatgccgagatctgagaaa
gcgaagctgaaggcggagatcctcacctgtgagcatgaagcggcagactccgcgaccgca
gacctcaggtctctcgccaagaggatctacgaggcctacctgaggaactttcacatgagc
aaggtcaaagcccgggtcatcctcgcgggaaagaccggacacaacccaccttttgtcatc
catgacatggagacgttgtgcatggctgagaagacgcttgtggccaagatggtggccaac
ggcatccagaacaaggaggccgaggtccgcatcttccactgctgccagtgcatgtcagtg
gagaccgtcacggagctgacggagtttgccaaggccatcccaggctttgcaaacttggac
ttgaatgaccaagtcactttgctcaaatatggcgtttatgaggccatattcacaatgctg
tcctccctgatgaacaaagatggaatgctggtggcatatggcaatggctttataacgcgg
gaattcctgaaaaacctgagaaaaccattctgtgacatcatggaacccaagtttgatttc
gccatgaagttcaacgcactggagctggatgacagtgacatttccctttttgtggctgct
ataatttgctgtggagatcgcccgggccttctcaacataggatacattgagaaaatgcag
gagggcatcgtgcatgtgctcaaactccacttgcagagcaaccatccagacgacaccttc
ctcttcccaaagctccttcaaaaaatggcggacctccggcagctggtcacagaacacgca
cagcttgtacagaccatcaaaaagacagagtcggacgcagctctgcaccctctgcttcaa
gagatctacagggacatgtactga
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