Sciurus carolinensis (gray squirrel): 124981942
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Entry
124981942 CDS
T08117
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124981942
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124981942
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Gene cluster
GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
124981942
NCBI-ProteinID:
XP_047403956
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Position
1:154107713..154125881
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AA seq
407 aa
AA seq
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MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ
TNSNAAGKQLRKESQKDRKNPLPPNVGVADKKEETQPPVALKKEGIRRVGRRPDQQLQGE
GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG
RGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQK
QISYNCSDLDQSNVTEETPEGEEHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDR
AKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGD
LGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggcacctacaggaaggcttcggctgcgtggtcaccaaccgattcgaccagtta
tttgacgacgaatcggaccccttcgaggtgctgaaggcagcagagaacaagaaaaaagaa
gccggcgggggcggcgttgggggacctggggccaagagcgcagctcaggccgcggcccag
accaactccaacgcggcaggcaaacagctgcgtaaagagtcccagaaagaccgtaagaac
ccgctgccccccaacgttggcgtggctgacaagaaagaggagacgcagccgcccgtggct
cttaagaaagaaggaataagacgtgttggaagaagacctgatcaacaacttcagggtgaa
ggaaaaataattgatagaagaccagaaaggcgaccacctcgtgaaagaagatttgaaaag
ccacttgaagaaaagggtgaaggaggcgaattttcagttgatagaccgattattgaccga
cccatccgaggccgtggtggtcttggaaggggtcgaggaggccgaggacgtggaatgggt
cgaggagatggatttgattctcgtggcaaacgtgaatttgataggcatagtggaagtgat
agatcttctttttcacattacagtggcctgaagcatgaggataaacgtggaggtagcgga
tctcacaactggggaactgtcaaagatgaattaacagagtcccccaaatacattcagaaa
caaatatcttataattgcagtgacttggatcaatcaaatgtgactgaggaaacacctgaa
ggtgaagaacatccagtggcagacactgaaaataaggaaaacgaagttgaagaagttaag
gaagagggtccaaaagagatgactttggatgaatggaaggccattcaaaataaagaccga
gcaaaagtagaatttaacatccgaaaaccaaatgaaggtgctgatgggcaatggaagaag
ggatttgttcttcataaatcaaagagtgaagaggctcatgctgaagattcggttatggac
catcatttccggaagccagcaaatgatataacgtctcagttggagatcaattttggagat
ctaggccgcccaggacgtggtggcaggggaggacgaggtggacgtgggcgtggtggacgc
ccaaaccgtggcagcaggactgacaagtcaagtgcttctgcccctgatgtggatgaccca
gaggcattcccagctctggcttaa
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