Sciurus carolinensis (gray squirrel): 124982000
Help
Entry
124982000 CDS
T08117
Name
(RefSeq) putative ATP-dependent RNA helicase DDX11-like protein 8 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124982000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124982000
Enzymes [BR:
ncar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124982000
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
124982000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
Motif
Other DBs
NCBI-GeneID:
124982000
NCBI-ProteinID:
XP_047404058
LinkDB
All DBs
Position
4:64889355..64983689
Genome browser
AA seq
950 aa
AA seq
DB search
MPVLRCRGVEEGCCRKGTTSNSLDPGDARFQEESCQPSTEASEGTMTNRTQEGIHFPFPF
PPYPIQKAFMTELYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKRQEEALLL
EPGEDPLGSGKDRPPFPSSSCQDPPDPLRPAGEPDWVTQFVQKKEERDLVERLKEEQIRR
KKREERLQQTRHNAQLKYAAKRLRQEEEETESLLRLSKEMLAAGTEAEQLEQLESGEEEL
VLAEYESDEEKRTACGVDEDEDDLEEEHITKIYYCSRTHSQLAQFVHEVQKSPFGKETRL
VSLGSRQNLCVNEDVKSLGSVQLINDRCMEMQRSKQEKKNRTEEDKPKKRRQETQAACPF
YNHEQMQFLRDEILVEVKDMEQLVTLGKEARACPYFGSRFAIPAAQLVVLPYPMLLHAAT
REAAGIRLQGQVVIIDEAHNLIDTITGIHSAEVSGSQLCQAHSQLFQYMERYGKRLKAKN
LMYIKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQVDNINLFKVQR
YCEKSMVSRKLFGFTERYGAVFPSSREQPKLTGFQHFLKSLQPGVTEAPVAPVEEDEAKA
PRSSSPLMNIEGFLAALTTANHDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVKECRAV
VIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPDNILPLIICSGPSNQQLEFTY
QKRELPQMMEETGRILCNLCNVVPGGVICFFPSYEYQRQVHAHWDKSGLLARLAVRKKIF
QEPKRASQVEQVLMAYSKCITSCGHVGGTVTGALLLSVVGGKMSEGINFSDDLGRCVVMV
GMPYPNIRSPELQEKMAYLDQTLPRTPGQAPPGKALVENLCMKAVNQSIGRAIRHQRDFA
SIVLLDQRYARPSTLAKLPAWIRDRVEVKATFGPAFAAMRKFHREKSGPS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgccagtattgcgttgcagaggcgtggaagaaggatgctgcagaaaaggaaccacaagc
aacagccttgatcctggtgatgctcgttttcaagaggaaagctgtcagccttccacagag
gcatcagaaggaaccatgactaatagaactcaggaaggcatccatttcccttttcccttc
ccaccctatcccatccagaaagctttcatgacagaactgtaccaggttttggaagctggc
aagattgggatatttgagagtccaacaggcacaggaaagtccttaagtctcatttgtggg
gccctctcctggctccgtgactttgagcagaagaaacggcaagaagaggcacttctcctg
gaacctggagaagatcccttaggtagtgggaaggaccggcccccatttccctcatcttcc
tgccaagacccccctgaccccctgaggcctgctggagaaccagactgggtcacccagttt
gtgcagaagaaagaagaaagggacctggtggagcgactgaaggaggagcagatcaggagg
aagaagcgggaagagcgcctgcagcagacccgccacaatgcacagctcaagtatgcagcc
aagcgcttgagacaggaagaagaagagacagagagtctcctccgcctcagcaaggagatg
ctggcagcaggaacagaggcagagcaactagagcagctggaatctggggaggaggagctg
gttcttgcagaatatgagagtgatgaggagaaaagaacagcctgtggagtggatgaggac
gaggacgacctggaggaagagcatataactaagatttattactgcagtcggacacactcc
cagctggctcaatttgtgcacgaagtacagaagagtccctttggcaaggaaacccgactt
gtctccctcggctcccgacagaacctttgcgtgaatgaagatgtgaaaagcctgggttct
gtgcagcttatcaatgaccgctgcatggaaatgcagagaagcaaacaggagaagaaaaac
agaactgaggaagacaagccaaagaagaggcggcaggagacccaggctgcctgccccttc
tacaaccacgagcagatgcagtttctccgggatgagatcctggtggaggtgaaggacatg
gagcagctggtgacccttgggaaggaggctcgggcctgcccttattttgggagccggttt
gctatccctgcagcccagctagtggtgctgccctatccaatgctactgcatgcagccacc
cgggaagctgctggcatccgactgcagggccaggtggtcatcattgatgaggcacacaac
ctgattgataccatcacaggcatccacagcgcagaggtcagcggttcccagctctgccag
gcccattcccagttgttccagtatatggaaagatatgggaagcgtttgaaggccaagaac
ctgatgtacattaagcagatcctgtatttgctggagaagtttgtggctgtgctgggaggg
aacattaagcaaaatcccaatacacagagcctctcgcaaacagggacagagctgaagacc
atcaatgacttcctctttcagagccaggtggacaacattaacctgttcaaggtgcaacgg
tactgcgagaagagcatggtcagcaggaagctctttggctttacagaacgctatggagca
gtcttcccatcttcccgggagcagcccaaactgactgggtttcagcatttcctaaagagc
ctacaacctggggtcaccgaggctcctgtggcccctgtggaggaggatgaggccaaggcc
ccgagatcctcttccccactgatgaacatcgaaggcttccttgcagctctcactactgcc
aaccacgatggcagggtcatcctgagccgccaaggcagcctcagtcagagtagcctcaaa
ttcttactcctgaatccagctgtgcactttgcccaggtggtgaaggaatgccgggcagtg
gtcattgcaggtggcaccatgcagccggtgtctgactttcgtgagcagctgctggcatgt
gctggggtggaagctgagcgagtggtggagttttcctgtggccacgtgatccctccagac
aacatcttgcccctcatcatctgcagcggaccctccaaccagcagttggaattcacatac
cagaaaagagagctgcctcagatgatggaggagacaggccgcattctctgtaacctgtgt
aatgtggtccctggaggggtgatctgttttttcccctcctatgagtaccaacgccaggtc
cacgcccactgggacaagagtggtctgctggcccgcctggctgttaggaaaaagatattc
caggaacccaaaagagcaagccaggtagagcaggtgctgatggcatattctaagtgcatc
acgagctgtggccatgtgggaggcacagtgacaggtgccctgcttctctctgtggtcgga
ggaaagatgagtgaagggatcaacttctctgatgacctgggtcggtgtgtggtgatggtg
ggcatgccctaccccaacatcaggtctccagagctacaagagaagatggcctacttggat
cagacccttcctaggaccccaggtcaggcccccccagggaaggctttggtggagaatctg
tgtatgaaggctgtcaaccaatccataggcagggccatcaggcaccagagggactttgcc
agcatagtgcttctggatcagcggtatgcccgcccctcaaccctggcgaagttgccagcc
tggatccgagaccgggtggaggtcaaagccacttttggccctgcttttgctgctatgcgg
aagtttcatcgggagaagtcaggcccttcctga
DBGET
integrated database retrieval system
