Sciurus carolinensis (gray squirrel): 124982016
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Entry
124982016 CDS
T08117
Name
(RefSeq) homeobox protein Hox-C6 isoform X1
KO
K09306
homeobox protein HoxA/B/C6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124982016
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
124982016
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124982016
NCBI-ProteinID:
XP_047404076
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Position
4:113953060..113966411
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AA seq
289 aa
AA seq
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MGPARRLLRLPRALPRRRHGPGAGARGTRLRRPGLESVGPEKGKGSTVGLWRGPEGPKTG
AFLLAYCGNRRPDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSS
RGPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWM
QRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIK
IWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREETEEEKQKE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgggcccagcccgccgcctgctccggctgccgcgcgctctcccgcggcgcaggcacggc
ccaggggctggcgcccggggaaccaggctgcgccggccgggactcgagtctgtgggacct
gaaaagggcaaggggagtacagtgggactgtggaggggcccggaaggcccgaaaacggga
gcctttctcttggcgtattgtgggaaccgccgaccggacgtcctccctaacgtcgccctc
aattccaccgcctatgatccagtgaggcatttctcgacctatggagcagccgttgcccag
aaccggatctactcgactcccttttattcgccacaggagaatgtcgtgttcagttccagc
cgggggccgtatgactatggatctaattccttttaccaggagaaagacatgctctcaaac
tgcagacaaaacaccttaggacataacacacagacctctatcgctcaggattttagttct
gagcagggcaggactgcgccccaggaccagaaagccagtatccagatttacccctggatg
cagcgaatgaattcgcacagtggggtcggctatggagcagaccggaggcgcggccgccag
atctactcgcggtaccagaccctggaactggagaaggaatttcacttcaaccgctaccta
acacggcgccggcgcatcgagatcgctaatgcgctctgcctgaccgagcggcagatcaaa
atctggttccagaatcgcaggatgaagtggaaaaaagaatctaatctcacgtccacgctt
tcagggggcggcggaggggccgcagctgacagcctgggaggaaaagaggaaaaacgagaa
gagacagaagaggagaagcagaaagagtga
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