KEGG   Sciurus carolinensis (gray squirrel): 124982039
Entry
124982039         CDS       T08117                                 
Name
(RefSeq) ras-related protein Rab-5B isoform X1
  KO
K07888  Ras-related protein Rab-5B
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04014  Ras signaling pathway
ncar04137  Mitophagy - animal
ncar04144  Endocytosis
ncar04145  Phagosome
ncar04148  Efferocytosis
ncar04962  Vasopressin-regulated water reabsorption
ncar05132  Salmonella infection
ncar05146  Amoebiasis
ncar05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    124982039
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124982039
   04145 Phagosome
    124982039
   04137 Mitophagy - animal
    124982039
   04148 Efferocytosis
    124982039
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    124982039
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124982039
   05152 Tuberculosis
    124982039
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    124982039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124982039
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124982039
   04031 GTP-binding proteins [BR:ncar04031]
    124982039
Membrane trafficking [BR:ncar04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    124982039
 Endosome - Lysosome transport
    124982039
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124982039
  Exosomal proteins of other body fluids (saliva and urine)
   124982039
  Exosomal proteins of colorectal cancer cells
   124982039
  Exosomal proteins of melanoma cells
   124982039
GTP-binding proteins [BR:ncar04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    124982039
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 124982039
NCBI-ProteinID: XP_047404147
LinkDB
Position
4:116340111..116359006
AA seq 268 aa
MCAIIPCLILLFSEVTAVNRTVEAWKSPPLFPSPFAALWHPPPSTLSHSDNLAMTSRSTA
RPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDT
TVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIV
IALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ
NLGGAAGRSRGVDLHEQSQQNKSQCCSN
NT seq 807 nt   +upstreamnt  +downstreamnt
atgtgtgccattataccttgtttaatcctactcttttcagaagtaactgctgttaatagg
actgttgaggcctggaagtcccctccccttttcccttccccctttgccgctttgtggcat
ccccctccctctaccctttcccattctgataatctggccatgactagcagaagcacggcc
aggcccaatgggcagcctcaagccagcaaaatatgccagttcaaattggtcctgctggga
gaatctgcagtggggaagtctagcctggtattacgttttgtcaaagggcagttccatgag
taccaggagagtaccattggagcggccttccttacccagtccgtttgtctagatgacaca
acagtcaagtttgagatctgggacacagctgggcaggagcgataccacagcttagctccc
atgtactacaggggtgcccaagctgcaattgtggtttatgatattactaatcaggaaacc
tttgcccgggcgaagacatgggtaaaggaactacagcggcaggccagtcctagcatcgtt
attgccttggcagggaacaaagcagacctggccaacaagcgcatggtggagtatgaagag
gcccaggcatatgcagatgacaacagcttattgtttatggagacttcagccaagacagct
atgaacgtgaatgatctcttcctggcaatagctaagaagttgccaaagagcgaaccccag
aatctgggaggtgcagcaggccgaagtcggggtgtggatcttcatgagcagtcccagcag
aacaagagccagtgttgtagcaactga

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