Sciurus carolinensis (gray squirrel): 124982041
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Entry
124982041 CDS
T08117
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124982041
03015 mRNA surveillance pathway
124982041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124982041
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124982041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
CDGP
AAA_23
Motif
Other DBs
NCBI-GeneID:
124982041
NCBI-ProteinID:
XP_047404153
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All DBs
Position
4:complement(116273752..116294784)
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AA seq
203 aa
AA seq
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MATPYVTDETGGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKPELPP
GLSPEATTPVTPSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSLGET
TQLPSAPQSSQVAPTAASDPPDSAATTEKAKKIKNLKKKLRQVEELQQRIQAGEVSQPSK
EQLEKLARRRALEEELEDLELGL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccctatgtaactgacgagaccggcggcaagtacatcgcctcaacacagaga
cctgacgggacctggcgcaagcagcggagggtgaaagaaggctatgtgccccaggaggag
gtcccagtgtatgaaaataagtatgttaagtttttcaagagtaaaccagagctgcctcca
gggctaagccctgaggccaccactcctgttaccccatcaagacctgaaggtggtgaacca
ggcctctccaagacagccaaacgcaacctgaagcgaaaggagaaaaggcggcaacagcag
gagaaaggagaggcagaggccttgagccggactcttgataaggtgtccctgggagagaca
acccaactccccagtgctccacaaagctcccaggtagccccaacagctgcttctgatcca
cctgattcagctgccaccaccgagaaagccaagaagataaagaacctaaagaaaaagctt
cggcaggtggaagagctacaacagcggatccaggctggagaagtcagtcagcccagcaaa
gagcagctggagaagctagcaaggaggagggcgctggaggaggagctagaggacttagag
ctaggcctgtga
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