Sciurus carolinensis (gray squirrel): 124982055
Help
Entry
124982055 CDS
T08117
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124982055
Enzymes [BR:
ncar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
124982055
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124982055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
124982055
NCBI-ProteinID:
XP_047404176
LinkDB
All DBs
Position
1:complement(120375110..120395657)
Genome browser
AA seq
480 aa
AA seq
DB search
MAATARTPHATGFPAEGRCSYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPISSLSEDQLG
NLIKKLRKASEGLNSTLKDHIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPVLREGKLPVVGIGKHLCGVATDLALRCLVETYAASFEESNEEPLAKRIK
NDKTEKEINTLTKEGNEKNVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMRKTSFEVSSVTTKTKDNPNDDSEEHDDGGYRITDDNSESLPGLLT
VEEKKKIGHLCKLLIDQGRIQYLQQKGFNPTLQYYTDPLVSLENVLLTALPIHSSPETTA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacggcgcggacgccgcatgcgactggctttccagcagagggtagatgcagt
tactatgtggaaaagaagaagcggttctgcagaatggtggtggccgcggggaaaaggttc
tgtggtgaacacgctggagccgcggaggaagaaaatgctcggaaaagaatcctgtgtcct
ttagatccaaagcacacagtatatgaagatcaactagcaaaacatttgaaaaaatgtaat
tcaagggagaagccaaaacctgatttctttattcaagatattaatgcaggcttaaaggat
gaaacagaaatacctgaacaattagttccaatttcttctctatctgaagaccagttggga
aacttaattaagaaattgagaaaagcaagtgaaggtttgaattctacacttaaagatcac
attatgtcccatccagcattacacgatgcccttaatgaccctaaaaatggtgattctgca
accaagcacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctggtagaaaaagtgaccaca
agattcaaagtagatggcaaacacagaaagaaaaattcagtgtttgaaagacttcaaatt
gatattcaacacttatgcttgaataagattcctgtgctgagagaagggaaactacctgtg
gtaggaattggaaagcatctatgtggtgtggcaacagatcttgcattacggtgtttggtt
gaaacctatgctgccagttttgaggaaagcaatgaagaacctttagccaaacgcataaag
aatgataaaacagaaaaagaaattaacactttgaccaaggaaggaaatgaaaaaaatgtc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcagggccctaggccttggagcagtggaa
ttccactatttccagcgaatgagtagttgggcaacttgtggaatgcggaaaacatctttt
gaagtctcaagtgttaccacaaagacaaaagataatccgaatgatgatagtgaagagcat
gatgatggaggatacagaatcacagatgacaactctgagagtttgcctgggcttcttact
gttgaagaaaagaagaaaatagggcatctttgtaaattgctgattgaccaaggccgaatc
caatatttacagcagaagggattcaatcctactttacagtactatacagatcctttggta
tctttggaaaatgtattgttaactgctttaccaattcattcttcaccagaaacaactgct
taa
DBGET
integrated database retrieval system
