Sciurus carolinensis (gray squirrel): 124982066
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Entry
124982066 CDS
T08117
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124982066
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Other basic domains
RF-X
124982066
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GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
124982066
NCBI-ProteinID:
XP_047404215
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Position
4:161674922..161830952
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AA seq
735 aa
AA seq
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MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
QTLYTMEDSRDEHRKLIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKGEGSTAEVREEIILTEAAPPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG
LSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRSTHVPSSSVTHRIPVYPHREEHGY
TGSYNYGSYGNQHPHPMQSQYPALPHDSAISGPLHYSPYHRSSAQYPFNSPTSRMEPCLM
SSTPRLHPTPVTPRWPEVPTANTCYTSPSVHSTRYGNSSDMYTPLTTRRNSEYEHMQHFP
GFAYINGEASTGWAK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggttactggaggaacccgacatggattccacagagagctggattgaaaga
tgtctcaatgaaagtgaaaacaaacgttattccagccacacatctctggggaatgtttct
aacgatgaaaatgaggaaaaagaaaataatagagcatccaagccccactccactcctgct
actctgcaatggttggaggagaactatgagattgcagagggcgtctgtattccccgcagt
gccctctatatgcattacctggatttctgtgagaagaacgatacccagcccgtcaatgcc
gccagctttgggaagatcataaggcagcagtttcctcagctgaccaccagaagactcggg
acccgaggacagtcaaagtaccattactacggcattgcggtgaaggaaagctcccaatat
tatgatgtgatgtattccaagaaaggagccgcctgggtgagcgagacgggcaagaaagaa
gtgagcaaacagacagtggcatattcaccccggtccaaacttggaacgttgctgccagag
tttccaaatgtcaaagatctaaatctgccagccagcctgcctgaggagaaggtttctacc
tttattatgatgtacagaacacactgtcagagaatactggacactgtaataagagccaac
tttgatgaggttcaaagtttccttctgcacttttggcaaggaatgccgccccacatgctg
cccgtgctgggctcctccaccgtggtgaacatcgtcggcgtgtgcgactccatcctctac
aaagctatctccggggtgctcatgcccaccgtgctgcaggcgttacccgacagcttaact
caggtgattcgaaagtttgccaagcagctggatgagtggctaaaagtggctctccacgac
ctcccagaaaatttgcgaaacatcaaatttgaattgtcgagaaggttttcccaaatcctg
agacggcaaacatcactaaatcatctttgccaggcatctcgaacggtgatccacagtgca
gacatcacgttccaaatgctggaggactggaggaacgtggacctgaacagcatcaccaag
caaaccctctataccatggaagattctcgcgacgaacaccggaaactcatcatccagttg
taccaggagtttgaccacctgctggaggagcagtcgcccatcgagtcctacatagagtgg
ctggataccatggtggaccgatgcgttgtaaaggtggctgccaagagacaagggtccctg
aagaaagtggcccagcagttcctcttgatgtggtcctgtttcggcacaagggtgatccgg
gacatgaccttgcatagtgcccccagcttcgggtcttttcacctaatccacttgatgttt
gatgactacgtgctttacctgttagaatctctgcactgtcaggagcgggccaacgagctc
atgcgagccatgaagggagaaggcagcactgcagaagtccgagaagagatcatcttgacg
gaggcggccccaccaaccccttcaccagtgccatcgttttctccagccaagtctgccaca
tccgtggaggtgccacctccctcctcccctgtcagcaacccctccccagagtacactggc
ctcagcactacaggagcaatgcagtcatatacctggtctctaacatatacagtgacaact
gctgctgggtccccagctgaaaactcccaacagctgccctgtatgaggagcactcatgtg
ccctcctcctccgtcacacacaggataccagtttacccccacagagaggagcatgggtac
acaggaagctataactatgggagctatggcaaccagcatcctcacccaatgcagagccag
tatccggccctccctcacgactcggccatctctgggccactccactactccccttatcac
cggagctctgcacagtacccttttaatagccccacttcccggatggaaccttgtttgatg
agcagtactcccaggctgcatcctacccctgtcactccccgatggccagaggtgcccaca
gccaacacgtgctacacaagcccgtctgtgcactccacgaggtatggaaactctagtgac
atgtacacacccctgaccacgcgcaggaattctgagtacgagcacatgcaacactttcct
ggctttgcttacatcaacggagaggcctccacaggatgggctaagtga
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