Sciurus carolinensis (gray squirrel): 124982080
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Entry
124982080 CDS
T08117
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124982080
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124982080
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124982080
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124982080
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124982080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124982080
NCBI-ProteinID:
XP_047404243
LinkDB
All DBs
Position
1:194050121..194117076
Genome browser
AA seq
1036 aa
AA seq
DB search
MAPRLQLEKAAWRWAETVRPEEVSQEHIETAYRIWLEPCIRGVCRRNCKGNPNCLVGIGE
HIWLGEIDENSFHNIDDPNCERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLC
PSTCSDYIMGDGVSEEKDYEPQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQKNPDVRNIVQQQFCGEYAYVTVCSHCGRESKLLSKFYELE
LNIQGHKQLTDCISEFLKEEKLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFV
FDRQTGHKKKLNTYIGFSEILDMEPYVEHKGGSYAYELSAVLIHRGVSAYSGHYIAHVKD
PQSGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRL
QTQEKPNTMVEVPAFLQELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLP
AGAEPYEFVSLEWLQKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYS
RYGGGPRLTVKALCKECVVERCRVLRLKNQLNEDYKAVNNLLKATVKGTDGFWVGKSSLR
SWRQLALEQLDEQDGEADQSNGKVNGSSFSKDESKEERKEEEEELNFNEDILCPHGELCI
SENERRLVSKEAWSKLQQYFPKAPEFPSYRECCSQCKILEREGEENEALHKMIANEQKTS
LPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEWRKFVRKPTRCSPVSSVGNSALLCPHG
GLMFTFASMTKEDSKLIALVWPTEWQLIQKLFVVDHVIKITRIEVEDANPSEKQYISEPK
LCPECREGLLCQQQRDLREYTQATIYVHKVVDNKKVMKDAAPELNVSSSETEEDKEEAKP
DGEKDPDFNQSSGGAKRQKIAHPSYTAYQKQVIRRSMRHRKVRGEKALLVSANQTLKELK
IQIMHAFSVAPFDQNLSIDGKILSDDCATLGTLGVIPESVILLKADEPIADYAAMDDVMQ
VCMPEEGFKGTGLLGH
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcggctgcagctggaaaaggcggcctggcgctgggcggagacggtgcggccc
gaggaggtgtcgcaggagcacatcgagaccgcctaccgcatctggctggagccctgcatc
cgcggcgtgtgcagacgaaactgcaaaggaaatccaaattgcttggttggcattggtgag
catatttggttaggagaaatagacgaaaatagtttccataacatcgatgatcccaattgt
gaaaggagaaaaaagaactcatttgtgggcctgacgaacctgggagccacttgttacgtc
aacacatttcttcaagtgtggttcttaaacttggagctgcggcaggccttgtacctatgt
ccgagtacctgtagcgactacataatgggagatggtgtctcagaagagaaagattatgag
cctcagacgatttgtgagcatctgcagtacttgtttgccttgttgcaaaacagtaataga
cgatacattgatccatctggatttgttaaagccttgggattggacactgggcaacagcag
gatgcccaagaattttcaaagctctttatgtccttattggaagatactttgtctaaacaa
aagaatccagatgtgcggaacatcgtgcagcagcagttctgcggggagtatgcgtacgtc
actgtttgcagtcattgtggcagagagtctaagcttttatcaaagttctatgaactggag
ttaaatatccaaggccacaaacagttaacagattgtatctcagaatttttaaaggaagaa
aaattagaaggagacaatcgatacttttgtgaaaattgtcaaagcaaacagaacgccaca
aggaagatccggcttcttagccttccctgcactctgaacttgcagctgatgcgctttgtc
tttgacaggcaaactggacataagaaaaaactgaatacctacattggcttctcagaaatt
ttggacatggagccttatgtggaacataaaggcgggtcctatgcctacgagctcagcgca
gtcctcatacacagaggagtgagtgcttattccggccactacattgcccatgtgaaagac
ccacagtctggtgaatggtataagtttaatgatgaagacatagaaaagatggaggggaag
aaattacaactagggattgaggaagatctagcagaaccttctaagtcccagacccgaaaa
ccaaagtgtggcaaaggaactcattgctctcgaaatgcatacatgttggtttatcggctg
cagacccaagaaaagcccaacacgatggtcgaagttccagcctttcttcaagagctggta
gatcgggataattccaaatttgaggagtggtgtattgaaatggctgagatgcgtaagcaa
agtgtggataaaggaaaagcaaaacacgaagaggttaaggagctgtaccaaaggttacct
gctggagctgagccctatgagttcgtctcccttgaatggcttcaaaagtggctggatgag
tcgacacccaccaagcctattgacaatcatgcttgcctgtgctcccatgacaagcttcat
ccagacaaaatatcaattatgaaaagaatatctgagtacgcggcggatattttctacagt
agatacggaggaggcccaagactaactgtgaaagccctgtgtaaggaatgtgtagtagag
cgttgtcgcgtgttgcgtctgaagaaccagctaaatgaagattacaaagctgtcaataat
ctcctaaaagcaacagtaaagggcacggatggattctgggtggggaaatcctccttgcgg
agctggcgccagctcgcccttgaacaactagatgagcaagatggcgaagcagaccaaagc
aatggcaaagtgaacggcagcagcttcagcaaagatgaatcaaaggaagaaagaaaagaa
gaggaggaggaattaaatttcaatgaagacattttgtgtccacatggggagttgtgcata
tcagaaaatgaaagaagacttgtttctaaagaggcctggagcaaactgcagcagtacttc
ccaaaggcgcccgagtttccaagttacagagagtgctgctcccagtgcaagattttagaa
agagaaggtgaagaaaatgaagccttacataagatgattgccaacgagcaaaagacttct
cttccaaatttgttccaggacaaaaacagaccctgtctcagtaactggccagaggatacg
gatgtgctctatatcgtgtcccagttctttgtagaagaatggcggaaatttgtcagaaaa
cctaccagatgcagccctgtgtcatcagttggaaacagcgcccttctgtgtccccatggg
ggactcatgtttacatttgcttccatgaccaaagaagattcgaaacttatagctctcgta
tggcccaccgagtggcaactgattcaaaagctctttgttgtggatcatgtaattaaaatc
acaagaattgaagtggaagatgcaaacccttcagagaagcagtatatttctgagcctaaa
ctctgtccagaatgcagggaaggcttactgtgccagcagcagagagatcttcgtgagtac
actcaagccaccatctatgtccacaaagtcgtggacaataaaaaggtgatgaaggatgca
gctccagagctgaacgtgagtagttctgagacagaggaggacaaggaagaggccaaacca
gacggagagaaagatccggactttaaccaaagcagtggcggagcaaagcggcagaagata
gcgcatccgagttacacggcctatcagaagcaagtcattcggcggagtatgcggcatagg
aaggtccgcggagagaaggcacttctcgtttctgctaatcaaacactgaaagagttgaaa
attcagatcatgcacgcgttttcagtcgctccttttgatcagaatttgtctattgatgga
aagattctaagtgacgactgtgccacccttgggaccctcggtgttattcctgagtctgtg
attttattaaaggctgatgaaccgattgcagattatgctgcaatggatgacgtcatgcaa
gtttgtatgccagaagaagggtttaaaggtactggtctacttggacattaa
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