KEGG   Sciurus carolinensis (gray squirrel): 124982081
Entry
124982081         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5A-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncar01009]
    124982081
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncar03036]
    124982081
Enzymes [BR:ncar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     124982081
Protein phosphatases and associated proteins [BR:ncar01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124982081
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124982081
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 124982081
NCBI-ProteinID: XP_047404248
LinkDB
Position
4:complement(65245863..65326148)
AA seq 1690 aa
MAGVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPNLDLKEKVTSEVLSNDIQTSPEPGTRMNILPKRTRRVKSQSESGEVTRNTELKKLQ
IFGAGPKVVGLAMGAKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG
RGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGRRKMLPEEEEYALCGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPNDLCPCPMQKKCLRYRY
PLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFSHKKDLIELRVMLEDAEDRKYPENEL
FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDVGRTRTKLTVEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ
ARWLDDVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRHSVTSLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGSNYAYL
EQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GIYGSGKNRRKKVKELIEKXKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEA
MHSLRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSGSQKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQASLPSFQQSA
FNRVVSSVSSSPRQTMDYDDEETDSDEDIRETYGYDIKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKMKGKD
SSEKKRKRKLEKVEQFFGEGKQKSKELKKMDKPKKKKLKLNADKSKELNKLAKKLAKEEE
RKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCEGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDSPGQLPPPSFIMSYK
LPVEDLKETS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcgggtgtggggccggggggctacgcggcggagttcgtgccacccccggagtgtccg
gtctttgagcccagctgggaggagttcacagacccgctcagcttcatcggtcgcatccgg
cctctggccgagaaaactggcatctgcaaaatacgaccgcccaaggattggcaacctcca
tttgcgtgtgaagtaaaaagctttcggttcactccacgagtccagcgcctgaatgaactt
gaggcaatgaccagagtgagactggacttcttggatcaactggcaaaattttgggaactt
caagggtctactttgaaaattcctgtggtggagagaaaaatcctggatctatatgctttg
agcaagattgttgccagcaaaggaggttttgaaatggtcaccaaagagaagaaatggtct
aaagtgggtagccgcttgggatatctgccaggaaaaggaactgggtctcttttgaagtca
cactatgaaaggattttatacccttacgagcttttccaatctggtgtcagccttatgggt
gtacagatgcctaatttagatcttaaggaaaaagtgacgtctgaggttctcagcaatgat
atccaaacttccccagagccaggcacaagaatgaacattctgccaaagagaacaagacgt
gtcaagtctcagtcagaatctggagaagtgacaagaaacacagaactgaagaagcttcag
atttttggagctggacccaaggttgtggggctggcaatgggagcaaaagataaagaagat
gaggtcacccgaagaagaaaagttaccaacaggtcagacgcatttaacatgcaaatgaga
caacggaaaggaactctctctgttaactttgttgatctctatgtttgtatgttttgtggt
cggggaaataatgaagataaattgcttttgtgtgatggatgtgatgacagctaccataca
ttttgtctaattccaccactacctgatgtacccaaaggagactggaggtgtcctaagtgt
gttgctgaggaatgtaacaaaccccgagaagcctttggatttgaacaagctgtacgagaa
tatacacttcagagctttggagagatggcagataattttaagtctgattatttcaatatg
ccagtccatatggttcccacagaactagtagaaaaggaattctggcgactggtgagcagc
attgaagaagatgttattgtagagtatggagctgatatctcctcaaaagactttggaagt
ggatttcctgtgaaggatggtcggagaaagatgttgccagaagaagaggaatatgcactt
tgtggttggaatttgaataacatgcctgtcctggagcaatctgttcttgcacatattaat
gtggacatttctggtatgaaggtgccatggctctatgtgggaatgtgcttctcttctttt
tgctggcacattgaagatcattggagttattccattaactacttgcactggggggagccg
aagacatggtatggtgtgccatctcatgctgctgaacaactggaggaggtgatgagagag
ttggcacctgagttatttgaatctcagcctgatctcctacatcaattagtcaccatcatg
aaccccaatgtgctaatggagcatggtgtgcctgtgtacaggaccaatcagtgtgctggc
gagtttgttgtgacatttcctcgtgcctatcactctggatttaaccagggctacaacttt
gctgaagctgtgaacttctgtactgctgactggttgcctattggacgacagtgtgtaaat
cattaccgccgactgaggcgtcattgtgtcttttcacatgaggaactcattttcaagatg
gcagcagatccagaatgtttagatgtggggctggctgctatggtctgcaaagaattgact
cttatgactgaagaagaaacacgtttaagggagtctgttgtacaaatgggtgtcttgatg
tcagaagaagaagtgtttgaacttgttcctgatgatgagcgacagtgttcagcatgcaga
acaacatgttttctctctgctctcacatgctcctgcaatcctgagcggctcgtatgtctc
taccatccaaatgatttgtgtccctgccccatgcagaagaaatgtcttagatatcgctac
ccactagaagatctcccttctcttctttatggtgtaaaagtcagggcacagtcttacgac
acttgggtcagtcgagttacagaagcattatctgctaacttcagccacaaaaaagatctg
attgaattgcgagtaatgctggaggatgccgaggatagaaaatacccagagaatgagctc
tttcgaaaactcagggatgctgtaaaagaagctgagacttgcgcttctgtggctcagcta
cttctgagcaaaaaacagaaacacaggcagagcccagatgttggaaggactcggaccaaa
ctgacagtagaagaattgaaggcttttgtccaacaactatttagtcttccatgtgtcatc
agccaagctcgacaagtaaagaatttgctggatgatgtagaagaatttcatgaacgtgct
caggaggccatgatggatgaaaccccagactcttccaaacttcagatgttgatagacatg
ggttctagtctctatgtggagctacctgaattacctcgactaaagcaagagctacagcag
gctcggtggttggatgacgttagattgaccttgtcagatccacaacaagtcactttggat
gtcatgaagaaactgattgactctggagtagggttagcaccccaccatgctgtggagaaa
gcaatggctgaactacaggagcttctcactgtctctgaacgatgggaagaaaaggctaag
gtctgcctacaggcaagacctaggcatagtgtgaccagtttagaaagcattgtgaatgaa
gctaagaacattccagcttttctacccaatgtgttgtccctaaaagaagccttacaaaag
gctcgagaatggacagctaaagtagaagctattcagagtggtagcaactatgcttacttg
gagcagcttgagagtttatctgctaaagggcgccctatccctgtgcgccttgatgcactg
ccccaagtggagtcacaggtagcagcagcacgggcatggagagaacgaactggacggacc
tttcttaagaagaattccagccatacgttgttacaggtgctaagtccccggactgacatt
ggtatatatgggagtggtaaaaacagaaggaaaaaagtaaaagaactaatagaaaaanga
aaagaaaaggacctggatcttgagcctttgagtgatctggaggaaggactggaagaaacc
agggatacagctatggtggtggcagttttcaaagaacgagagcaaaaagagatcgaagca
atgcattccctcagagcagccaacctagccaagatgacaatggtggaccgcatagaagaa
gtaaaattttgcatttgccgcaagacggccagtgggtttatgctacagtgtgagctctgc
aaagactggttccataacagctgtgttccccttcctaaatcaggttcccagaaaaaaggg
tccagctggcaggctaaagaagtaaaattcctttgccctctttgtatgcggtctcgaagg
cccaggctagagactattctgtcactacttgtatcccttcagaagttgcctgtgcggttg
cctgaaggagaggccctacagtgtttgacagaacgtgccatgagttggcaagatagggca
cgacaagccctagccacagatgaactgtcctctgccctagccaaactctctgtgttaagc
cagcgtatggtggaacaggcagctcgggaaaaaactgaaaagatcatcagtgcagaactc
caaaaagcagccgccaatccagacttacaggcaagtttacccagtttccagcagtctgct
tttaaccgggtagtaagcagtgtatcatcttcccctcgacaaacaatggactatgatgat
gaagaaacagattctgatgaagacattcgggagacatatggctatgacatcaaggacaca
gccagtgtgaagtcctctagtagtctggaacccaatcttttttgtgatgaagaaattccc
atcaagtctgaggaagtggtaactcatatgtggactgcaccttcattctgtgcagaacat
gcttattcttctgcttctaagagttgttctcaaggttctagcactccaagaaaacaacct
cggaagagccctttggttcctcgaagtttggaacctccggtattggagttgtcaccggga
gctaaagcccaactggaagagctcatgatggttggagacctccttgaagtgtctctagat
gagacacaacacatatggaggattttgcaggccacacacccaccctcagaagacagattc
ctacatattatggaggatgacagcatggaagagaaaccattaaaaatgaaaggcaaggac
tcttcagagaagaaacggaaacggaaactagaaaaggtagaacaatttttcggagaagga
aaacagaaatccaaggagctaaagaaaatggacaaacctaaaaagaagaaattaaaatta
aatgcagacaaatcaaaggagctgaacaaactggccaagaaactagcaaaagaagaagag
agaaagaaaaagaaagaaaaggctgctgcagccaaagttgaacttgtaaaagagagtact
gaaaagaaaagagagaaaaaagtgctggacatcccttcaaaatatgactggtcaggagca
gaggaatctgatgatgagaatgctgtatgtgcagcacaaaactgccaaagaccctgtaag
gacaaggtagactgggtacaatgtgaaggtggctgtgatgagtggtttcatcaagtttgt
gtgggtgtatctccagaaatggctgaaaatgaagattacatctgtataaactgtgcaaag
aagcaggggccagatagcccaggtcaattaccacctccttccttcataatgagctacaaa
ctaccagtggaggatcttaaagagaccagttag

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