Sciurus carolinensis (gray squirrel): 124982113
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Entry
124982113 CDS
T08117
Name
(RefSeq) tripartite motif-containing protein 75-like
KO
K12037
tripartite motif-containing protein 75
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124982113
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124982113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Bacillus_HBL
UvrD_C
zf-rbx1
zf-RING_6
zf-Nse
zf-RING_10
Imm49
TRAF3_RING
FlgT_M
zf-ANAPC11
LMBR1
Tn7_Tnp_TnsA_C
Motif
Other DBs
NCBI-GeneID:
124982113
NCBI-ProteinID:
XP_047404307
LinkDB
All DBs
Position
4:20506217..20507623
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AA seq
468 aa
AA seq
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MAVAAALTRLQAEAKCPICLDDLRDPVTIECGHNFCRFCIQQSWADLQDRFPCPTCRHQC
EEGHFRSNAQLGRMIEIARLLHISLRKRKRPDKTNLCEKHDEVLTLFCEEDLELLCALCA
RPPDHYGHYVRPVEEAASHHRETLQSYMEPLKRQVADVQKLISMQSKIPLELREKVEHQK
QKLSSEFELLNQFLEREQQAALSRLAEEEKDIQQKLSENLTAFSNYACTLKSLLRRLEEH
NVLSEVELLSQIKHFYQKSDSEISPPIFSIHLRREACNFPPQYSALQKIIKEFKVDIVLD
PETAHPNLIVSEDKKCVRYTKRKQNVPDIAKRFRANPVVLGLPDFRSGRHFWEVGVGDKS
EWAVGVCRASLSTKARRPSAQQGCWKIRQLNDGYEAPGAVPAPLRLDLRARGIGIFLDCE
LGEVSFYNMPEKSHICTFTDTFSGPLRPYFFIGPGSKPLRICMGTDCE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgtagcagcagccctaacaagacttcaggcggaagccaagtgccccatctgcctg
gatgacctgagagacccggtcaccatcgaatgtggacacaacttctgtcgcttctgcatc
cagcagtcctgggcagacctgcaagacaggttcccttgtcctacctgtcgtcatcagtgt
gaagaagggcacttcaggagcaacgcccagctggggaggatgattgaaattgccaggctg
ctccacatcagcctgaggaagaggaagaggcctgacaagaccaacctgtgtgagaagcac
gacgaggtcctgacccttttttgtgaggaggacctggagctgttgtgtgccctgtgcgct
cggccccctgaccactacggccactacgtgaggcccgtcgaggaggccgcctctcaccac
agggagacgctgcagagttacatggagcccctgaagaggcaagtggcagacgttcaaaaa
ttaataagcatgcaaagcaaaatacccctagagctgagagagaaggtggaacaccagaaa
cagaaattatcctccgaatttgaacttctgaaccaatttttagagcgtgaacaacaggca
gctctgtcaaggttagctgaagaagagaaggacattcagcaaaaactcagtgaaaaccta
acagcgttttcaaactacgcttgtacgctcaaaagtttactaagaaggttggaagagcac
aatgtattgtctgaggtggaactgctgtcccaaattaagcatttctaccagaagtctgac
agtgagatcagcccaccaatcttttcaattcatttaaggagggaagcctgcaattttcct
ccccagtattctgccctgcagaaaataataaaagaattcaaagtagatatagttctagac
cccgaaacagcccaccctaacttgattgtttctgaggataaaaaatgtgtccgatacacg
aagagaaaacaaaacgtccctgatattgccaaaaggttcagagctaacccagttgtccta
ggtcttcccgatttccgttctgggaggcatttctgggaagtgggagtgggagacaagtct
gagtgggctgttggcgtctgcagagcctctctgtccaccaaggcaaggcgaccatcagcc
cagcagggatgctggaagattcggcagctgaatgatggatacgaggctccaggagctgtt
ccagcccctctgcggttagacttgagagccagaggcattggtattttcctggactgtgag
ctgggggaggtctccttctacaacatgcctgagaaatctcacatctgtacgttcacagac
acgtttagtggacctctgcgcccttatttcttcataggacctggttcaaaacccctcaga
atctgtatgggaacagattgtgaatga
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