Sciurus carolinensis (gray squirrel): 124982132
Help
Entry
124982132 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-3-like
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124982132
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124982132
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124982132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_2
InlK_D3
Motif
Other DBs
NCBI-GeneID:
124982132
NCBI-ProteinID:
XP_047404345
LinkDB
All DBs
Position
4:complement(28792212..28794560)
Genome browser
AA seq
753 aa
AA seq
DB search
MYKFSDQALLWILNNCYFNSSSLVPLFLTKGKSIPHCSQRILRLKKNRPQRLKQLKSNKD
RGTMIFYSITGPGADSPTEGVFTIEKETGWLLLNKPLDREKIAKYELFGHAVSENGASVE
EPMNISIMVTDQNDHKPDSTQAVFRGNVLEGVLPGTSVMQVTATDEDDAINTCNGVLAYS
IHSQEPKDPHDLMLTVHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAIM
EILDANDSAPVFDPQKYEAQVPENAVGHEVQKLTVTDLDVPISPAWHANYRIVGGDCGDH
FIITTHLESNQDILTTRKGLDFEAQNQHTLYVEVTSEDPFVVTLPTSTATVVVHVENVNK
APVFVPPSKVVEAQEGISIGGISFIYTAQDPDKEDQKISYHILRDPAGWLAMDPDSGQVT
AAGILDHEDEPFVRNNVYEIMVLATDNGNSPTTGTGTLLLTLTDINYHGPIPEPREITIC
NQSPVPQVLNITDKDLSPXSSPFQAQLTHDSDIYWMAEVNEKGDTVALSLKKFLKQDTYN
VHLSLSDHGNKEQLTVISATVCDCQGHVKTCPQPWKGNFIFPVLGAVLFLLLLLLVLLLL
VRKKRKVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPEVVLRNDVAP
TFMPTPMYLPRPANPDEIGNFIIENLKAANTDPAAPPYDSLLVFDXEGSGSDASSLSSLM
SSASDQDQDYYYLNQWGSRFKKLADMYGGGEED
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaattcagtgatcaggccctactctggattctgaataattgctatttcaactcc
agtagtcttgtgcccctttttttgaccaaaggaaagagcataccacattgcagtcagaga
atacttcgattgaagaaaaatagaccccagaggctaaaacagctcaaatctaataaagac
aggggcaccatgattttctacagcatcacagggcctggagcagacagccccactgagggt
gtctttaccatagagaaggagacaggctggttgttattgaataagccactggaccgggaa
aagatcgccaagtatgagctttttggtcatgctgtgtcagagaatggtgcttcagtggag
gagcccatgaacatctccatcatggtgacagaccagaatgaccacaagcccgactccacc
caagctgtcttcagagggaatgtcttggagggcgtactccctggtacttcagtgatgcag
gtgacagccacggatgaggatgatgccatcaacacctgcaacggggtgctcgcctactcc
atccatagccaggaaccaaaggacccgcatgacctcatgctcactgtccaccggagcaca
ggcaccatcagtgtcatttccagtggcctggaccgtgagaaagtccctgaatacacactg
accatccaggctacagacatggacggggatggctccaccaccacagcagtggcaataatg
gaaatccttgatgccaacgacagtgctcctgtgtttgacccccagaagtatgaagcccag
gtgccagaaaatgcagtgggtcatgaggtgcagaagttgacagtgactgatctggatgtc
cccatctcaccagcatggcatgccaactaccgcattgtgggaggtgactgtggggaccat
tttatcatcaccacccaccttgagagtaaccaggacatcttgacaaccaggaagggtttg
gattttgaggcccaaaaccagcacaccctatatgtagaagtgaccagtgaggatcccttt
gtggtgacgctcccaacctccacagccactgtagtggtccatgtggagaatgtgaacaag
gcccctgtgtttgtcccaccctccaaagttgtcgaggcccaggagggtatctccattgga
ggtatctccttcatctacactgcacaggaccccgacaaggaggatcaaaagatcagctac
cacatcctgagagacccagcaggatggctagcaatggacccagacagtgggcaggtcact
gctgcaggcatcttagaccatgaggatgagccatttgtgaggaacaacgtctacgaaatc
atggtcttggccacagacaatggaaactctcccaccactggaacaggaacccttctccta
acccttactgacatcaactaccatggcccaattcctgagccccgtgagatcaccatctgc
aaccaaagccctgtgcctcaagtgctgaacatcacggacaaggacctgtcccccnattcc
tcccctttccaggcccagctcacacatgactcagacatctactggatggcagaagtcaat
gaaaaaggagatacagtggccttatccctaaagaagttcctaaagcaagacacgtacaat
gtgcacctttctctatctgaccacggcaacaaggagcagctaacagtgatcagtgccact
gtgtgtgactgccaaggccatgtgaagacctgcccccaaccctggaaaggcaacttcatc
ttccccgtcttgggggctgtcttgtttctgctactcctcctgctggtgctcctcttattg
gtgagaaagaagcggaaggtcaaagagccccttctgctcccagaagatgacacacgtgac
aatgttttctattatggtgaagagggtggtggtgaagaggaccaggattatgatatcacc
caactccaccggggtctagaggccaggcctgaggtagttcttcgcaatgatgttgcacca
accttcatgcccacacccatgtacctgccccggccagccaacccagatgaaatcggcaac
ttcatcattgagaacctgaaggcagccaacacggaccctgcagccccgccctacgactcc
ctactagtgtttgactaggagggcagcggctctgatgcgtcctccctgagctcccttatg
tcctcagcctctgaccaagaccaggattactattatctgaaccagtggggcagtcgcttc
aagaagctggcggacatgtacggaggcggtgaggaggactag
DBGET
integrated database retrieval system
