Sciurus carolinensis (gray squirrel): 124982247
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Entry
124982247 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 17-like protein 6
KO
K11845
ubiquitin carboxyl-terminal hydrolase 17 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124982247
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124982247
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124982247
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124982247
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124982247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124982247
NCBI-ProteinID:
XP_047404506
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Position
4:6173663..6175149
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AA seq
495 aa
AA seq
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MEAALPHCGGKSLFDAFVKPTCSSNAGYAKVHWVFLPTESPLSPCTNAHLNNGLAPVGTQ
LSPREELSLSWQRSSVAGDGLQNIGNTCYVSAALQCLTYTPPLANDMLSQDPSQTCPPHR
VCMCVMQAHMARALHNPGDVIWPLPVLAADFHTWQQEDAHEFLLFTIDALQKACLRGHKQ
PGAHSQDITLMHQIFGRFWRLQIKCLCCHDLSHTFDPYLDITMDILEAQSLQQALEQLVK
PEWLXGENAYHCGVCLKKMPACKTLSLQTASKVLMLVLKPFSVLTGDKIAKQVHYPECLD
MQPYMAQQSSGPLACALYAVLVHDGVSCHSGYYYCYIKAGNGQWYKMDDAKVVACDITCV
LSQCAYILFYVQKSELEPDSGSLSVDREPRALGPEDTVLGAAQGELQGDSCSHVEESQEA
LVGTTTRELTLDLCKFLQEQNQPKSDSNPKKVEFTLPPNGVTTHQSKHRGGQRIHNNQEI
YEPNKVPRAQSMWCP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagctttgccccactgtggaggtaagtctctgtttgatgcctttgtgaaacct
acatgttcctcaaatgcaggttatgctaaagtccattgggtttttctacctacagagtca
ccattgtcaccttgcactaatgcacacttgaataacggtttggctcctgtggggacacaa
ctgtctcctagggaggaactatctctgagctggcagagatcttctgtggctggtgatggg
ctgcagaacattggaaacacttgctatgtgagtgctgctctgcagtgtctgacatacacc
cctcctctggccaatgacatgctgtcccaggatccctcccaaacctgtcctcctcacagg
gtctgcatgtgtgtgatgcaagctcacatggcacgggctctccacaaccctggggatgtc
atttggcccttgcctgtattggctgctgacttccacacatggcagcaggaagatgcccat
gagtttctgctgttcaccatcgatgccctgcagaaagcatgtctgcgtgggcacaagcag
ccaggtgctcactcccaggacatcaccctcatgcaccaaatatttggaaggttctggaga
ttgcaaatcaagtgtctctgctgccacgacctttcacacacttttgacccctacctggac
atcaccatggacatcctggaagctcagagtctgcagcaagccttggagcagttggtgaag
cctgaatggctanaaggggaaaatgcctatcactgtggtgtttgtctgaagaagatgcca
gcctgcaagaccttgagcctgcagactgcctcaaaggttctcatgcttgtattgaaacca
ttctcagttctcacaggtgacaaaattgctaagcaggtgcactatcctgagtgtcttgac
atgcagccatacatggctcagcagagcagcggcccactggcctgtgccctctatgccgtg
ctggtccatgatggggtgagctgtcacagtggatattactattgctacataaaagctggg
aatggccaatggtataaaatggatgatgctaaggtagtggcctgtgacattacttgtgtc
ctgagtcagtgtgcatatatcctcttttatgtccagaagagtgaacttgaacctgacagt
gggagtctgtcagtagacagggaaccgagagctcttgggcctgaagacacagtcttggga
gctgcccaaggggagctccagggagactcctgtagccacgtggaggagtcacaggaggcc
ctggtgggcaccaccaccagagaactcaccttagatctgtgtaagttcctccaagaacag
aaccaaccaaagtctgactccaaccccaagaaagtagaattcactctgcctcccaatgga
gtcaccactcaccagtcaaaacacagaggagggcagagaattcacaataaccaggaaata
tacgagcccaacaaggtaccaagagcacagtcaatgtggtgtccatga
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