Sciurus carolinensis (gray squirrel): 124982371
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Entry
124982371 CDS
T08117
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00061
Fatty acid biosynthesis
ncar00071
Fatty acid degradation
ncar01100
Metabolic pathways
ncar01212
Fatty acid metabolism
ncar03320
PPAR signaling pathway
ncar04146
Peroxisome
ncar04216
Ferroptosis
ncar04714
Thermogenesis
ncar04920
Adipocytokine signaling pathway
Module
ncar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124982371
00071 Fatty acid degradation
124982371
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124982371
09143 Cell growth and death
04216 Ferroptosis
124982371
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124982371
03320 PPAR signaling pathway
124982371
09159 Environmental adaptation
04714 Thermogenesis
124982371
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ncar01004
]
124982371
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124982371
Enzymes [BR:
ncar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124982371
Lipid biosynthesis proteins [BR:
ncar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124982371
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of breast milk
124982371
Exosomal proteins of breast cancer cells
124982371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124982371
NCBI-ProteinID:
XP_047404859
LinkDB
All DBs
Position
4:complement(37529557..37590537)
Genome browser
AA seq
698 aa
AA seq
DB search
MQAHELFRYFRMPELVDIRQYVRTLPTNTLMGFGAFAAITTFWYATRPKALKPPCDLSMQ
SVEVAGSDGARRSTLLDSDEPLVYFYDDVRTVYEGFQRGIQVSNNGPCLGSRKPDQPYEW
LSYKQVAEMSECIGSALIHKGFKASPDQYIGIFAQNRPEWVIIEQGCFAFSMVIVPLYDT
LGAEAITYIVNKAELSLVFADKPEKARLLLEGVENKLTPGLKIIVLMDTFGSDLVERGKK
CGVEVISMKAMEDLGRANRRKPKPPAPEDLAVICFTSGTTGNPKGAMITHQNVVSDCSAF
VKVTENAVTPSPDDILISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQP
TIFPVVPRLLNRMFDRIFAQANTTLKRWLLDFASKRKEAELRSGIIRNNSLWDKLIFHKI
QSSLGGKVRLMVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCSLSVPGDWTAGHV
GAPMPCNFIKLVDVEEMNYMAAKGEGEVCVKGPNVFKGYLKDPAKTAEALDKDGWLHTGD
IGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENVYLRSEPVAQVFVHGESLQAFLIAI
VVPDVEILCSWARKKGFEGSFEELCRNKDVKKAILEDMVRLGKDSGLKPFEQVKGIALHT
ELFSVDNGLLTPTMKAKRPELRNYFRSQIDELYSTIKV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcacgaattgttccggtattttcgaatgccagagctggttgacatccggcag
tacgtgcgcacccttccgaccaacacgcttatgggctttggagcatttgcagccatcacc
accttctggtacgccacgaggcccaaggccctgaagccaccatgtgacctctccatgcag
tcagtggaagtggcgggtagtgatggtgctcgaaggtccacactccttgacagtgatgag
cctttggtgtacttctatgatgacgtcagaacggtatacgaaggcttccagaggggtatt
caggtgtcaaataacggcccttgtttaggctctcggaagccagaccaaccctacgagtgg
ctttcctataaacaggttgcagaaatgtcggagtgcatcggctcagcgctgatccacaag
ggattcaaggcctctccagatcagtacattggcatctttgctcaaaatagacctgagtgg
gtgattattgaacagggatgcttcgctttttcaatggtgatcgttcccctttacgatacc
cttggagccgaagccatcacgtacatagtcaacaaagctgagctctctctggtttttgct
gacaagccagagaaggccagactcttattggagggtgtagaaaataagttgacaccaggc
cttaaaatcatagttctcatggacacctttggcagcgatttggtggaacgaggcaaaaag
tgtggagtggaagtcatcagcatgaaggcaatggaggacctcggaagagccaacagaagg
aagcccaagcctccagcacctgaagatcttgcagtaatttgtttcacaagtggaactaca
ggcaaccccaaaggagcaatgattactcaccaaaatgttgtgagcgactgttcagctttt
gtgaaagtgacagagaacgcagtcactccttccccagatgatattttgatatctttcttg
cctctcgcccatatgtttgagagagttgtagagtgtgtaatgctgtgccatggagctaaa
ataggatttttccaaggagatattaggctgcttatggatgacctcaaggtgcttcaaccc
actatcttccctgtggttccaagactgctgaatcggatgtttgaccgaatttttgcacaa
gcaaacaccacgctgaagcgatggcttttggactttgcctcaaagagaaaagaagcagaa
cttcgcagtggcatcattagaaacaatagcctgtgggataaactcatcttccacaaaata
cagtcaagcctgggaggtaaagtccggttgatggtcacaggagccgcacctgtatccgcc
acagtgctgacgtttctgagagcagctcttggctgtcagttctatgaaggctatggacag
accgagtgcacggctggctgttctctcagtgtgcccggagactggacagcaggccatgtc
ggtgcccccatgccttgcaattttataaaacttgttgatgtggaagaaatgaactacatg
gctgccaagggtgagggcgaggtgtgtgtgaaagggcccaatgtgtttaagggctacttg
aaggacccagcaaaaacggcagaagctttggataaggatggctggctgcacacaggagac
attggaaagtggctaccaaatggcacattgaagattattgacaggaaaaaacacatattt
aaactggcacaaggagaatacatagcacctgaaaagattgaaaatgtttacctgcgaagt
gaacctgttgctcaggtgtttgtccatggagaaagcttgcaggcctttcttatagcaatt
gtggtaccagatgttgagatattgtgttcctgggcccgaaagaaaggctttgaaggatcc
ttcgaggaactgtgtagaaataaggatgtcaaaaaagctatcctagaggacatggtgaga
cttgggaaagattccggtctaaaaccatttgaacaggttaaaggcattgctctacacact
gaattattttctgttgacaatggccttctgactccaacaatgaaggcaaaaaggccagag
ctacggaactatttcaggtcacagatagatgaactatactccaccatcaaggtttaa
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